Table 3 Primers to amplify target fragments of Dmrt1

From: New locus reveals the genetic architecture of sex reversal in the Chinese tongue sole (Cynoglossus semilaevis)

Primer name

Primer sequence (5′-3′)

Tm (℃)

Product length

Cyn_Z_8564889_PF

CAACTAAGACTTTTCAAACCC

62

643

Cyn_Z_8564889_PR

TTAAAATCCCAACACTCACAC

62

 

Dmrt1_exon1_PF

CCATTAATTACAAAATGTTACAGG

60

494

Dmrt1_exon1_PR

AGTAGCAGTAGCAGTATCAGT

60

 

Dmrt1_exon2_PF

TAAGGCAATAAAGAAAGGTAAGGTC

60

298

Dmrt1_exon2_PR

GCTGTGTTGTGAAGTCTGGT

60

 

Dmrt1_exon3_PF

TGTCCTTCTATCACTGCATTCTCA

62

276

Dmrt1_exon3_PR

GTGTTTTCCAAATGTATCAGTATGC

62

 

Dmrt1_exon4_PF

AACAGGTAACAAGTACATTTCTGTG

62

391

Dmrt1_exon4_PR

TGAATGTCGAACGAGCAGGG

62

 

Dmrt1_exon5_PF

GGAGCGAGTCATTTGATCAGG

60

535

Dmrt1_exon5_PR

TGATTGGATCAGAGCATGATTGT

60

 
  1. PCR amplification was in a volume of 40 μl, containing 20 μl PCR Mix (TaKaRa), 50 ng template, and 0.5 μM of each primer. The PCR conditions were: 95 °C for 3 min, followed by 32 cycles of 94 °C for 30 s, corresponding melting temperature (Tm) for 30 s, 72 °C for 1 min, and a final extension step at 72 °C for 5 min