Table 1 Summary of CNVs and CNVRs identified from the goat ADAPTmap populations

From: Diversity of copy number variation in the worldwide goat population

Group

CNV

CNVR

Unique

Count

Avg.a

Gain/Avg.a

Loss/Avg.a

Length/ Avg.a (kb)

SDb (kb)

Countc

Length/Avg.a (kb)

SDb (kb)

WAS

152

225

4

71/1

154/3

38,968/735

157

112

20,566/184

152

EME

794

1369

7

737/4

632/3

273,106/1401

197

401

91,449/228

251

ANE

245

341

3

98/1

243/2

56,351/548

140

192

39,668/207

183

MAD

421

647

8

106/1

541/7

141,478/1814

196

244

64,345/264

257

NWA

880

1750

10

251/1

1499/8

371,023/2039

183

355

91,611/2581

267

SEA

868

1954

5

683/2

1271/3

379,503/921

195

505

115,129/228

247

Total

2632

6286

6

1946/2

4340/4

1,260,428/1232

189

978

262,000/268

302

  1. Samples were divided into Western Asia (WAS), Eastern Mediterranean (EME), Alpine & Northern Europe (ANE), Madagascar (MAD), Northwestern Africa (NWA,) and Southeastern Africa (SEA) groups. CNVRs in this table represent non-redundant CNVR counts after merging both gain and loss CNVs identified within each group
  2. Note: aAvg. average. The average values are divided or normalized by sample counts except that the lengths are average lengths normalized by CNV and CNVR counts. NWAS = 53, NEME = 195, NANE = 103, NMAD = 78, NNWA = 182, NSEA = 412
  3. bSD standard deviation
  4. cThese numbers are non-redundant CNVR counts