Table 1 Simulation scenarios

From: Enhancing genetic disease control by selecting for lower host infectivity and susceptibility

Parameter

Basic parameter values

Alternative parameter values

N, nsires, ndamspersire, noffspring per sire/dam

10,000, 200, 50, 1

tgenerations of selection per replicate, nreplicates

20, 50

Genetic variance for susceptibility in baseline population \(({\boldsymbol{\sigma }}_{{\boldsymbol{Ag}}}^2)\)

0.5

0.2

Genetic variance for infectivity in baseline population \(({\boldsymbol{\sigma }}_{{\boldsymbol{Af}}}^2)\)

0.5

0.2

Environmental variance for susceptibility \(({\boldsymbol{\sigma }}_{{\boldsymbol{Eg}}}^2)\)

2

0.8

Environmental variance for infectivity \(({\boldsymbol{\sigma }}_{{\boldsymbol{Ef}}}^2)\)

2

0.8

Average effective contact rate (β)

0.02

Recovery rate (γ)

0.017

 

Selection accuracy for susceptibility (rg)

0.7

NA, 0.7

Selection accuracy for infectivity (rf)

NA

0.7, 0.5, 0.4, 0.3, 0.2

Selected proportions of sires for susceptibility

0.5

NA, 0.5

Selected proportions of sires for infectivity

NA

0.5, 0.8

Selected proportions of dams for susceptibility

1

Selected proportions of dams for infectivity

1

Contemporary group size

100

20

  1. Basic and alternative parameter values assumed in the simulation scenarios. NA corresponds to selection only on susceptibility or only on infectivity