Table 2 Fifteen microsatellite markers developed to genotype Drosophila melanogaster in this study.

From: Low levels of genetic differentiation with isolation by geography and environment in populations of Drosophila melanogaster from across China

Locus

Chr.

Position

Repeat motif

Allele number

Size range (bp)

Forward primer (5’-3’)

Reverse primer (5’-3’)

S04

2L

2,932,573

AGC

6

136–149

CTTCGCCTTTCCAGCTTTGT

GTCGTAGTTGTGTCGCTGTC

S09

2R

23,181,060

AGC

10

135–175

GGGCTTCCTCATCCGGAATT

GCCCACCTCGCTGATAATTG

S10

2R

12,896,467

AGCC

21

141–229

GTCCTTAGTCGAACCGCTCT

CACGAGCGACCATTGCATTT

S14

2R

13,082,536

AGC

9

159–194

TTGCTTTGTCTGATTGCGGA

CGAATCTGGCAACTGTGGAG

S17

2L

3,419,414

AGC

8

183–206

TCCGTTCCCATTCTTCTCGG

GCTCCGGCTGCAACTTAATT

S18

3L

12,644,547

AGC

8

181–214

CAAGGCAGAGCATCACCATC

CAAACTCACTTCCTGCGCTG

S28

3R

15,812,776

ACT

3

223–235

ATCCACGTCCCACCAGAAG

AAACGCACAACAACGCCATA

S39

2L

21,941,431

ATCCG

9

265–304

AAACGCATTTGCCCACCTTT

GGCACCGAACATCAATCTCC

S41

2L

9,658,593

AGC

11

290–325

AGTTAACAAGTGACACGCCC

ATCTCGAATCGCCTTGGCTA

S42

2L

16,449,207

ACC

6

287–305

TATTTAAGGGCATGGCGGGT

GCCACGAGGAATTGGACATC

S44

2R

11,206,856

AGC

8

312–337

GAGGTCGGTGAAAGGAGTGG

CGATCATCATTCTGCCGCAA

S47

2R

13,921,847

AGCC

11

307–357

GGTGCGCTCCTTAATGTCAG

ATGCATAAAGGTCCGGCAAG

S48

3R

5,290,483

AGG

4

324–336

GCTTCCCTCTCCAATTCTGC

ATGGATGGGCACTAACGGAA

S52

3L

13,589,683

AGC

7

350–367

GCCTTGCCAAGTTTCCAGTT

AAGCACACCATATCGCAGAC

S55

3L

8,663,943

ATC

7

343–359

GTTGTTGAAAGCGATTGCCC

CTTGTTGACGCGGCATCTAA

  1. Allele number and size range for each locus was calculated from 16 populations of Drosophila melanogaster in this study.
  2. Chr. chromosome.