Table 3 Candidate genes around the reliable QTNs and their functional annotation for seedling stage.
Pathotypes | Marker | CHR | TRANSCRIPT | Position (bp) | Descriptions |
|---|---|---|---|---|---|
12-5 | AX-94564902 | 1AL | TraesCS1A02G395200.1 | 560,946,979–560,952,119 | Drought induced 19 protein type, zinc-binding domain |
12-5 | AX-94795575 | 1BS | TraesCS1B02G024400.1 | 11,695,669–11,702,119 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II |
12-5 | AX-94694366 | 1DS | TraesCS1D02G030000.1 | 11,664,577–11,668,738 | Adaptor protein Cbl, N-terminal domain superfamily |
12-5 | AX-94744507 | 2BL | TraesCS2B02G618500.1 | 794,500,736–794,504,405 | Zinc finger, GATA-type |
12-5 | AX-95211729 | 3DL | TraesCS3D02G533100.1 | 608,924,067–608,931,731 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
12-5 | AX-95226287 | 3DL | TraesCS3D02G530600.2 | 607,094,510–607,098,157 | DEAD-box ATP-dependent RNA helicase 58, chloroplastic |
12-5 | AX-95168536 | 5DL | TraesCS5D02G528700.1 | 545,523,515–545,526,025 | F-box-like domain superfamily |
12-5 | AX-95226435 | 5DL | TraesCS5D02G559300.1 | 560,789,894–560,792,041 | Cytochrome P450 superfamily |
12-5 | AX-94931523 | 6DS | TraesCS6D02G048300.2 | 23,075,148–23,077,733 | Catalase, mono-functional, haem-containing |
77-5 | AX-94480950 | 3AL | TraesCS3A02G383600.2 | 633,052,725–633,055,395 | Probable magnesium transporter |
77-5 | AX-94701636 | 3AL | TraesCS3A02G538300.1 | 749,408,319–749,414,725 | Leucine-rich repeat domain superfamily |
77-5 | AX-94499868 | 3BL | TraesCS3B02G572200.1 | 803,198,582–803,201,434 | rRNA N-glycosidase |
77-5 | AX-94671785 | 3BL | TraesCS3B02G593500.2 | 817,174,846–817,186,826 | P-loop containing nucleoside triphosphate hydrolase |
77-5 | AX-94883935 | 3BL | TraesCS3B02G592000.1 | 816,276,316–816,278,437 | Isopenicillin N synthase-like |
77-5 | AX-94972939 | 3DL | TraesCS3D02G529900.2 | 606,948,752–606,950,236 | Oxoglutarate/iron-dependent dioxygenase |
77-5 | AX-94414881 | 3DS | TraesCS3D02G169100.1 | 144,779,767–144,782,297 | Domain of unknown function DUF1618 |
77-5 | AX-95100303 | 3DS | TraesCS3D02G066900.1 | 29,689,549–29,702,772 | Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily |
77-5 | AX-94847013 | 5DL | TraesCS5D02G356400.1 | 437,528,626–437,530,793 | Leucine-rich repeat domain superfamily |
77-5 | AX-95101610 | 6DL | TraesCS6D02G196400.1 | 272,645,711–272,648,516 | Tetratricopeptide-like helical domain superfamily |
77-5 | AX-94833633 | 7DS | TraesCS7D02G206700.2 | 164,179,874–164,205,637 | P-loop containing nucleoside triphosphate hydrolase |
77-9 | AX-94393003 | 1BS | TraesCS1B02G095900.1 | 99,751,699–99,755,558 | Amino acid transporter, transmembrane domain |
77-9 | AX-94691001 | 1DS | TraesCS1D02G114700.2 | 110,659,526–110,662,416 | PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily |
77-9 | AX-94481508 | 2AL | TraesCS2A02G497700.1 | 728,405,886–728,410,445 | Inositol-pentakisphosphate 2-kinase |
77-9 | AX-94880760 | 2BS | TraesCS2B02G110500.1 | 72,570,247–72,580,245 | Serine/threonine-protein kinase TIO |
X77-9 | AX-94681641 | 3AL | TraesCS3A02G525400.1 | 739,557,732–739,560,684 | Tetratricopeptide-like helical domain superfamily |
77-9 | AX-95211729 | 3DL | TraesCS3D02G533100.1 | 608,924,067–608,931,731 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
77-9 | AX-95226287 | 3DL | TraesCS3D02G530600.2 | 607,094,510–607,098,157 | DEAD-box ATP-dependent RNA helicase 58, chloroplastic |
77-9 | AX-94943882 | 5DL | TraesCS5D02G336100.1 | 425,652,239–425,654,135 | C2 domain superfamily |
77-9 | AX-94623196 | 6DL | TraesCS6D02G395600.1 | 468,095,605–468,100,014 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
77-9 | AX-94492006 | 7AS | TraesCS7A02G215200.1 | 180,650,193–180,663,921 | Sister chromatid cohesion protein Pds5 |
104-2 | AX-94777053 | 1AL | TraesCS1A02G421000.1 | 577,468,378–577,474,524 | Protein kinase-like domain superfamily |
104-2 | AX-94480950 | 3AL | TraesCS3A02G383600.2 | 633,052,725–633,055,395 | Probable magnesium transporter |
104-2 | AX-95211729 | 3DL | TraesCS3D02G533100.1 | 608,924,067–608,931,731 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
104-2 | AX-95226287 | 3DL | TraesCS3D02G530600.2 | 607,094,510–607,098,157 | DEAD-box ATP-dependent RNA helicase 58, chloroplastic |
104-2 | AX-94947385 | 5AL | TraesCS5A02G348200.1 | 551,047,743–551,050,672 | Flavin-containing monooxygenase |
104-2 | AX-95107192 | 5DL | TraesCS5D02G537600.1 | 550,184,040–550,191,990 | Aspartokinase/Bifunctional aspartokinase/homoserine dehydrogenase, catalytic domain |
104-2 | AX-94564853 | 7BL | TraesCS7B02G405400.2 | 673,955,432–673,963,147 | Ubiquitin specific protease domain |
104-2 | AX-94622619 | 7BS | TraesCS7B02G025700.1 | 24,400,331–24,409,900 | Zinc finger, RING/FYVE/PHD-type |
