Table 2 Numbers of SNPs with a z-score ≥2.0 for weighted mean European Bos taurus, African B. taurus and B. indicus ancestry components for the European hybrid, trypanotolerant African hybrid, and trypanosusceptible African hybrid groups across all autosomes for the MOSAIC and ELAI analyses of high- and low-density SNP data sets.
Group | Ancestry | HD MOSAIC | LD MOSAIC | HD ELAI | LD ELAI |
|---|---|---|---|---|---|
Residually admixed European | European B. taurus | 0 (0%) | 0 (0%) | 0 (0%) | 151 (0.49%) |
African B. taurus | 16,511 (2.69%) | 1546 (5.03%) | 26,561 (4.33%) | 1337 (4.35%) | |
B. indicus | 31,674 (5.16%) | 1865 (6.07%) | 33,110 (5.39%) | 1415 (4.61%) | |
Trypanotolerant African hybrid | European B. taurus | 23,816 (3.88%) | 1490 (4.85%) | 25,743 (4.19%) | 1229 (4.00%) |
African B. taurus | 7728 (1.26%) | 179 (0.58%) | 9056 (1.47%) | 627 (2.04%) | |
B. indicus | 18,367 (2.99%) | 723 (2.35%) | 18,083 (2.94%) | 801 (2.61%) | |
Trypanosusceptible African hybrid | European B. taurus | 26,035 (4.24%) | 1423 (4.63%) | 25,083 (4.09%) | 1173 (3.82%) |
African B. taurus | 16,998 (2.77%) | 494 (1.61%) | 23,356 (3.80%) | 1093 (3.56%) | |
B. indicus | 10,434 (1.70%) | 49 (1.60%) | 7823 (1.27%) | 460 (1.50%) | |
Total | 614,026 | 30,706 | 614,026 | 30,706 |
