Fig. 5: Differential expression of TE transcripts by class and family in embryos fathered by males from High versus Low competition environments. | Heredity

Fig. 5: Differential expression of TE transcripts by class and family in embryos fathered by males from High versus Low competition environments.

From: Environmentally induced variation in sperm sRNAs is linked to gene expression and transposable elements in zebrafish offspring

Fig. 5: Differential expression of TE transcripts by class and family in embryos fathered by males from High versus Low competition environments.

A Volcano plot of differentially expressed TEs by family from DESeq2 analyses looking at impact of high social stress and factoring in female_id. B Chromosomal distribution of the significantly differentially expressed genes and TEs that overlap along each chromosome with enrichment testing. Differentially expressed genes (dark blue), Differentially expressed TEs Class I (red), Differentially expressed TEs Class II (light blue). Regions where the overlap of Differentially expressed genes and differentially expressed TEs in genic regions is statistically significant—are highlighted in orange diamonds. In total there are 12 significant regions of enrichment out of a possible 1898.

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