Table 2 Anchor SSR markers tested on the three diploid rose mapping populations

From: Genotyping-by-sequencing application on diploid rose and a resulting high-density SNP-based consensus map

Mapping populations

Number of SSRs

Names of SSR

J14-3×LC

15

CL2845_LG5

CL2980_LG6

CL3881_LG4

H5_F12_LG1

Rh48_LG2

Rh72_LG7

RhAB9-2_LG1

RhABT12_LG4

RMS043_LG7

Rw12J12_LG3

Rw14H21_LG5

Rw22B6_LG7

Rw34L6_LG1

Rw35C24_LG3

Rw5G14_LG7

 

J14-3×VS

17

CL2845_LG5

CL2980_LG6

CL3881_LG4

CTG21_LG3

H5_F12_LG1

Rh48_LG2

Rh58_LG3

Rh72_LG7

RhABT12_LG4

RMS001_LG7

Rw12J12_LG3

Rw14H21_LG5

Rw22B6_LG7

Rw34L6_LG1

Rw35C24_LG3

Rw55E12_LG4

Rw5G14_LG7

   

OB×RF

21

BFACT47_LG3

CL2980_LG6

CL2996_LG2

CTG21_LG3

H5_F12_LG1

Rh48_LG2

Rh50_LG3

Rh72_LG7

Rh93_LG5

RhAB9-2_LG1

RhABT12_LG4

RMS003_LG7

RMS015_LG1

RMS043_LG7

Rw11E5_LG6

Rw12J12_LG3

Rw14H21_LG5

Rw22B6_LG7

Rw34L6_LG1

Rw35C24_LG3

Rw5G14_LG7

   
  1. Italicized SSR markers were grouped into the expected LGs but not included in the final map
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