Table 1 Portion of upregulated stress-related genes involved in oxidoreductase, oxidation–reduction, single-organism metabolism and biological processes and the response to stress in response to B. dothidea
Gene ID | Annotation | RNAi mock vs Vec mock (log2 fold-change) | p–v | RNAi inocation vs Vec inocation (log2 fold-change) | p–v |
|---|---|---|---|---|---|
Oxidoreductase activity | |||||
MDP0000735747 | Gibberellin 2-beta-dioxygenase 2 | 1.5984 | 4.49E−14 | 1.6161 | 6.00E−09 |
MDP0000136847 | (R)-mandelonitrile lyase 2 | 1.4548 | 2.48E−05 | 2.2236 | 3.58E−79 |
MDP0000158739 | Cytochrome P450 | 2.4089 | 2.36E−24 | 3.4183 | 6.91E−129 |
MDP0000742438 | Ferric reduction oxidase 4 | 2.2491 | 4.77E−67 | 2.3085 | 9.05E−90 |
MDP0000570102 | Protein SRG1 | 1.7835 | 3.81E−62 | 1.8106 | 1.22E−78 |
MDP0000611163 | Peroxidase | — | — | 2.3526 | 8.70E−16 |
MDP0000925883 | UDP-glucuronic acid decarboxylase 5 | 1.4681 | 3.87E−19 | 1.694 | 7.17E−29 |
MDP0000451182 | Peroxidase 66 | — | — | 4.8509 | 1.20E−08 |
MDP0000251295 | 1-aminocyclopropane-1-carboxylate oxidase | — | — | 1.652 | 3.36E−24 |
MDP0000234983 | Cytokinin dehydrogenase 5 | — | — | 1.6208 | 0.00037497 |
MDP0000442206 | Glutamate synthase [NADH] | — | — | 2.3915 | 1.18E−51 |
MDP0000306998 | Tropinone reductase | — | — | 1.0335 | 1.95E−05 |
Oxidation–reduction process | |||||
MDP0000509613 | NAD(P)H dehydrogenase | 1.2347 | 4.67E−33 | 1.6215 | 0 |
MDP0000255970 | Transcription factor DIVARICATA | 1.0258 | 0.0011272 | 1.1359 | 0.00014298 |
MDP0000555589 | Polyphenol oxidase | 4.0991 | 8.44E−38 | 4.0455 | 1.55E−40 |
MDP0000286750 | Ferritin-3, chloroplastic | — | — | 4.2438 | 0.00059104 |
MDP0000807470 | Sorbitol dehydrogenase | — | — | 1.0825 | 5.59E−07 |
MDP0000312559 | Probable nucleoredoxin 2 | — | — | 2.3805 | 0.00037441 |
MDP0000906067 | Photosystem II repair protein | — | — | 2.51 | 3.21E−09 |
MDP0000735022 | Beta-glucosidase 24 | — | — | 1.8177 | 6.52E−12 |
MDP0000130200 | Primary amine oxidase | — | — | 1.5744 | 4.77E−05 |
Single-organism metabolic process | |||||
MDP0000287919 | 4-hydroxycoumarin synthase 1 | 2.105 | 1.73E−16 | 2.5539 | 0 |
MDP0000257119 | 4-hydroxycoumarin synthase 2 | — | — | 3.8812 | 0.00059684 |
MDP0000180326 | Methionine gamma-lyase | 4.8137 | 5.89E−10 | 5.1866 | 2.42E−28 |
MDP0000266097 | Dephospho-CoA kinase | 1.0462 | 4.42E−37 | 1.3943 | 3.29E−120 |
MDP0000289339 | Cellulose synthase-like protein | 1.9853 | 1.93E−128 | 2.21 | 9.22E−192 |
MDP0000180890 | Probable aminotransferase | 2.3741 | 4.80E−05 | 4.265 | 2.66E−19 |
MDP0000319502 | Bark storage protein | — | — | 1.1989 | 1.68E−12 |
MDP0000239026 | Ocs element-binding factor 1 | — | — | 1.8719 | 1.25E−06 |
MDP0000219975 | Acetyl-CoA carboxylase 1 | — | — | 1.9818 | 2.98E−35 |
MDP0000133520 | Patatin-like protein 2 | — | — | 1.9469 | 3.35E−18 |
MDP0000137919 | CTP synthase | — | — | 2.7395 | 3.58E−06 |
MDP0000135529 | Alpha-amylase | — | — | 2.654 | 7.22E−05 |
Biological process | |||||
MDP0000280265 | Acidic endochitinase | 1.4679 | 1.3334E−38 | 1.9457 | 0 |
MDP0000390049 | Tryptophan aminotransferase-related protein 4 | 1.4662 | 1.2133E−47 | 1.7021 | 2.72E−245 |
MDP0000199977 | SPX domain-containing membrane protein | 1.2495 | 0.0049554 | 1.5426 | 2.9762E−07 |
MDP0000287302 | Thaumatin-like protein | 1.2316 | 2.79E−150 | 1.6295 | 0 |
MDP0000180890 | Probable aminotransferase | 2.3741 | 4.7997E−05 | 4.265 | 2.657E−19 |
MDP0000321210 | 50S ribosomal protein L18 | 1.8452 | 2.2985E−05 | 2.564 | 1.4141E−08 |
MDP0000126058 | Rhodanese-like domain-containing protein 4 | 1.1419 | 3.6208E−08 | 1.3563 | 3.8163E−11 |
MDP0000179851 | Caffeic acid 3-O-methyltransferase 1 | — | — | 1.7312 | 0.00075589 |
MDP0000230504 | Probable aldo-keto reductase 1 | — | — | 1.068 | 2.7665E−11 |
MDP0000321125 | Late embryogenesis abundant protein 2 | — | — | 5.3001 | 0.0032804 |
MDP0000805281 | Cyanogenic beta-glucosidase | — | — | 2.5017 | 1.287E−191 |
MDP0000490846 | Uncharacterised protein Mb2734 | — | — | 1.0332 | 8.7225E−06 |
MDP0000937817 | Calcineurin B-like protein 4 | — | — | 1.0809 | 4.7002E−06 |
MDP0000128326 | Ethylene-responsive transcription factor | — | — | 3.1451 | 0.0022472 |
Response to stress | |||||
MDP0000782085 | Pathogenesis-related protein | 1.1335 | 2.169E−177 | 1.1759 | 0 |
MDP0000642609 | Universal stress protein (USP) family protein | 2.3681 | 1.8358E−20 | 2.8868 | 1.7317E−89 |
MDP0000846849 | Glu S.griseus protease inhibitor | 2.5176 | 8.5997E−37 | 2.8343 | 0 |
MDP0000471879 | Proteinase inhibitor | 1.2793 | 6.0407E−09 | 2.0045 | 3.522E−151 |
MDP0000313454 | Major allergen Pru ar 1 | 4.8158 | 0.00032033 | 5.4776 | 5.4005E−16 |
MDP0000265782 | Heat shock protein 90 | — | — | 1.0131 | 7.2559E−07 |
MDP0000327191 | Glucan endo-1,3-beta-glucosidase | — | — | 4.417 | 0.0013841 |
MDP0000868045 | Dehydrin DHN1 | — | — | 1.6711 | 5.857E−301 |