Table 1 Gene involved in stomata development in N. colorata compared with other representative plant

  SPEECHLESS

SPCH

AT5G53210

Kalax.0066s0097

Kalax.0943s0016

Kalax.0277s0021

NNU 010414

NNU 013503

LOC Os06g33450

LOC Os02g15760

Spipo6G0039300

NC1G0180400

Atr|scaffold00015.95

Gb 32351

  MUTE

MUTE

AT3G06120

Kalax.0004s0103

Kalax.0418s0025

Kalax.0268s0032

Kalax.0539s0032

NNU 007035

LOC Os05g51820

NC2G0006530

Atr|scaffold00025.64

  FAMA

FAMA

AT3G24140

Kalax.0693s0014

Kalax.1863s0001

Kalax.0693s0015

Kalax.0693s0014

NNU 012009

NNU 025179

LOC Os05g50900

NF

NC3G0207550

Atr|scaffold00089.12

  SCREAM/ICE1

SCRM

AT3G26744

Kalax.0347s0049

Kalax.0029s0087

Kalax.0801s0007

Kalax.0234s0011

NNU 003962

NNU 003217

LOC Os11g32100

LOC Os01g70310

Spipo4G0062100

Spipo0G0129300

NC2G0294460

NC7G0236530

Atr|scaffold00016.130

Gb 18877Gb 40304

  SCREAM2

SCRM2

AT1G12860

  FOUR LIPS

FLP

AT1G14350

Kalax.0757s0004

Kalax.0556s0006

Kalax.0031s0030

Kalax.0089s0020

NNU 022886

NNU 000781

LOC Os07g43420

Spipo0G0157900

NC2G0034590

Atr|scaffold00010.370

Gb 06045

  MYB88

MYB88

AT2G02820

  HOMEODOMAIN GLABROUS2

HDG2

AT1G05230

Kalax.0393s0043

Kalax.0069s0102

Kalax.1016s0007

Kalax.1527s0001

NNU 019425

NNU 014296

LOC Os04g53540

LOC Os08g08820

LOC Os08g04190

Spipo7G0015400

NC1G0306950

Atr|scaffold00004.265

Gb 18862Gb 16030

  EPIDERMAL PATTERNING FACTOR1

EPF1

AT2G20875

Kalax.0168s0064

Kalax.1136s0002

Kalax.0140s0018

Kalax.0421s0001

Kalax.0001s0052

Kalax.0002s0022

NNU 024753

LOC Os04g54490

LOC Os04g38470

Spipo14G0058800

NC1G0135060

NC11G0122180

Atr|scaffold00003.277

Gb 37555Gb 00388Gb 38060

  EPIDERMAL PATTERNING FACTOR2

EPF2

AT1G34245

Kalax.0149s0034

Kalax.0314s0026

NNU 010187

Spipo15G0006400

NF

Atr|scaffold00010.278

  STOMAGEN/EPF-LIKE9

EPFL9

AT4G12970

Kalax.0185s0039

Kalax.0025s0112

Kalax.0033s0049

Kalax.0297s0025

NNU 022462

NNU 008635

LOC Os01g68598

Spipo7G0057500

NC3G0208820

Atr|scaffold00020

Gb 18813

  CHALLAH/EPF-LIKE6

EPFL6

AT2G30370

Kalax.0093s0085

Kalax.0322s0055

NF

LOC Os01g60900

LOC Os05g39880

Spipo29G0014100

NC3G0226990

NC4G0199650

Atr|scaffold00065.47

Gb 05485

  ERECTA

ER

AT2G26330

Kalax.0387s0036

Kalax.0284s0052

NNU 018228 NNU 010627

LOC Os06g10230

LOC Os02g53720

Spipo15G0047400

NC10G0163170

Atr|scaffold00024.267

Gb 26881

  ERECTA-LIKE1

ERL1

AT5G62230

Kalax.0858s0013

Kalax.1180s0007

NNU 001410

LOC Os06g03970

Spipo11G0029800

NC9G0271680

Atr|scaffold00069.214

Gb 15512

  ERECTA-LIKE2

ERL2

AT5G07180

NNU 020430

  TOO MANY MOUTHS

TMM

AT1G80080

Kalax.0093s0024

Kalax.0058s0095

NNU 003757

LOC Os01g43440

Spipo18G0010300

NC4G0153390

Atr|scaffold00051.26

Gb 10165

  STOMATAL DENSITY AND DISTRIBUTION1

SDD1

AT1G04110

Kalax.0525s0015

Kalax.0155s0004

NNU 010999

LOC Os03g04950

Spipo1G0013100

NC4G0239300

Atr|scaffold00039.113

Gb 35657

  CO2 RESPONSE SECRETED PROTEASE

CRSP

AT1G20160

NF

NNU 013210

LOC Os09g30458

Spipo3G0019800

NC2G037260

Atr|scaffold00152.21

Gb 39463

  YODA

YDA

AT1G63700

Kalax.0027s0088

Kalax.0305s0041

Kalax.0021s0011

Kalax.0119s0027

NNU 019513

NNU 006681

LOC Os02g44642

LOC Os04g47240

Spipo24G0030800

NC4G0020020

NC12G0094120

Atr|scaffold00009.178

Gb 12558

  MPK3

MPK3

AT3G45640

Kalax.0014s0191

Kalax.0055s0143

NNU 009572

NNU 005597

LOC Os03g17700

NF

NC2G0053420

Atr|scaffold00023.237

Gb 14122

  MPK6

MPK6

AT2G43790

Kalax.0019s0087

Kalax.0022s0025

Kalax.0082s0002

Kalax.0133s0041

NF

LOC Os06g06090

Spipo14G0031100

NF

Atr|scaffold00058.238

Gb 26499Gb 15256

 MKK4

MKK4

AT1G51660

Kalax.0510s0006

Kalax.0445s0039

Kalax.0283s0053

Kalax.0104s0058

NNU 012790

LOC Os02g54600

LOC Os06g09180

Spipo12G0053200

Spipo28G0018300

NC3G0229970

Atr|scaffold00011.127

Atr|scaffold00011.128

Gb 36141

  MKK5

MKK5

AT3G21220

  MKK7

MKK7

AT1G18350

Kalax.0543s0017

Kalax.0216s0025

Kalax.0039s0095

Kalax.1433s0007

NNU 016426

NNU 000259

LOC Os03g12390

Spipo15G0037300

NC8G0217780

NC10G0164550

Atr|scaffold00176.2

Gb 41213Gb 20818

  MKK9

MKK9

AT1G73500

  ARABIDOPSIS PROTEIN PHOPHATASE 2C

AP2C3

AT2G40180

Kalax.0107s0048

Kalax.0170s0065

Kalax.0441s0007

Kalax.0527s0028

NNU 012318

NNU 005774

LOC Os03g18150

Spipo22G0031600

Spipo23G0037200

NF

Atr|scaffold00065.64

Atr|scaffold00078.152

Atr|scaffold00007.121

Gb 40834Gb 22266

  PANGLOSS1

PAN1

AT2G42290, AT3G57830

Kalax.0222s0039

Kalax.0637s0020

NNU 012890

LOC Os08g39590

Spipo12G0035200

NC1G0088630

Atr|scaffold00022.305

Gb 28844

  PANGLOSS2

PAN2

AT4G20940

Kalax.0016s0247

Kalax.0114s0005

NNU 026348

LOC Os07g05190

Spipo32G0009300

Spipo0G0142000

NC14G0281210

Atr|scaffold00175.33

Gb 30406Gb 18587

  RHO-RELATED PROTEIN FROM PLANTS 9

ROP9

AT4G28950

Kalax.0192s0051

Kalax.0015s0042

Kalax.1214s0006

NNU 005916

NNU 003451

LOC Os05g43820

Spipo26G0003200

NC6G0252910

Atr|scaffold00002.129

Gb 09833

  BREAKING OF ASYMMETRY IN THE STOMATAL LINEGAE

BASL

At5g60880

Kalax.0236s0002

Kalax.1000s0001

NNU 008250

LOC Os04g39240

NF

NF

Atr|scaffold00006.135

Gb 36330

  POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION

POLAR

AT4G31805

Kalax.0020s0126

Kalax.0107s0095

Kalax.0250s0038

Kalax.0530s0021

NNU 019396NNU 013094

LOC Os06g08520

LOC Os02g55190

Spipo10G0014700

NF

Atr|scaffold00065.195

Gb 00304

  STOMATAL CYTOKINESIS DEFECTIVE 1

SCD1

AT1G49040

Kalax.0061s0068

Kalax.0190s0062

NNU 012674

LOC Os01g39380

Spipo21G0025200

NC3G0202830

Atr|scaffold00104.16

Gb 36258

  CRYPTOCHROME

CRY1

AT4G08920

Kalax.0428s0010

Kalax.1365s0004

Kalax.0290s0014

Kalax.0239s0053

NNU 001876

NNU 015266

LOC Os04g37920

LOC Os02g36380

Spipo15G0011900

NC8G0218290

Atr|scaffold00038.124

Gb 13122

CRY2

AT1G04400

Kalax.0094s0015

Kalax.0075s0050

NNU 010890

NNU 018834

LOC Os02g41550

Spipo1G0003600

NC12G0249420

Atr|scaffold00148.69

Gb 13122

  PHYTOCHROME

PHYA

AT1G09570

Kalax.0106s0002

Kalax.0005s0079

Kalax.0038s0184

Kalax.0172s0035

NNU 026354

LOC Os03g51030

Spipo6G0014200

NC10G0166490

Atr|scaffold00045.165

Gb 21967

PHYB

AT2G18790

Kalax.0613s0014

Kalax.0391s0019

Kalax.0996s0003

NNU 014452

LOC Os03g19590

Spipo6G0031800

NC5G0160900

Atr|scaffold00003.45

Gb 17897

  PYTOCHROME-INTERACTING FACTOR 4

PIF4

AT2G43010

Kalax.0495s0020

Kalax.0759s0011

NNU 026428

LOC Os03g43810

LOC Os07g05010

LOC Os03g56950

Spipo13G0048400

NC10G0166270

Atr|scaffold00039.9

Gb 07156

  CONSTITUTIVE PHOTOMORPHOGENIC 1

COP1

AT2G32950

Kalax.0049s0041

Kalax.0049s0041

NNU 005078

NNU 015709

LOC Os02g53140

Spipo31G0000500

NC1G0178350

Atr|scaffold00074.24

Gb 15627

  CONSTITUTIVE PHOTOMORPHOGENIC 10

COP10

AT3G13550

Kalax.0340s0003

Kalax.0021s0072

NNU 019762

LOC Os07g38940

Spipo2G0063200

NC1G0193740

Atr|scaffold00061.43

Gb 07763

  HIGH CARBON DIOXIDE

HIC1

AT2G46720

Kalax.0018s0006

Kalax.0090s0007

Kalax.1015s0012

Kalax.0013s0142

Kalax.1015s0014

NNU 006085

NNU 003630

LOC Os05g49900

LOC Os02g11070

LOC Os06g39750

Spipo14G0001700

Spipo21G0006400

NC6G0254440

NC1G0129310

Atr|scaffold00052.41

Gb 23820

  BRI SUPPRESSOR1

BSU1

AT1G03445

Kalax.0084s0077

Kalax.1286s0001

Kalax.0045s0074

Kalax.0289s0053

NNU 001649

NNU 024344

LOC Os05g05240

Spipo6G0007500

NC1G0193170

Atr|scaffold00004.204

Gb 36990

  BRASSINOSTEROID INSENSTIVIE 2

BIN2

AT4G18710

Kalax.0092s0006

Kalax.0164s0037

Kalax.1441s0002

Kalax.0375s0036

Kalax.0283s0042

Kalax.0104s0069

NNU 025519

LOC Os01g10840

LOC Os05g11730

LOC Os02g14130

LOC Os06g35530

Spipo18G0019800

Spipo14G0030500

NC9G0114290

NC13G0028550

Atr|scaffold00170.9

Gb 21469