Table 1 The light- and temperature-responsive elements in the promoters of PmBEAT genes
From: Expansion of PmBEAT genes in the Prunus mume genome induces characteristic floral scent production
Gene | Site name | Sequence | Number | Function |
PmBEAT34 | 5'Â UTR Py-rich stretch | TTTCTTCTCT | 1 | Cis-acting element conferring high transcription levels |
TTTCTCTCTCTCTC | 1 | |||
AE-box | AGAAACAA | 1 | Part of a module for light response | |
Box 4 | ATTAAT | 1 | Part of a conserved DNA module involved in light responsiveness | |
G-box | CACGTG | 1 | Cis-acting regulatory element involved in light responsiveness | |
CACACATGGAA | 1 | |||
CACGTA | 1 | |||
TACGTG | 1 | |||
GA-motif | AAAGATGA | 1 | Part of a light-responsive element | |
GT1-motif | GGTTAA | 1 | Light-responsive element | |
AATCCACA | 1 | |||
Gap-box | AAATGGAGA | 1 | Part of a light-responsive element | |
L-box | ATCCCACCTAC | 1 | Part of a light-responsive element | |
LTR | CCGAAA | 1 | Cis-acting element involved in low-temperature responsiveness | |
Sp1 | CC(G/A)CCC | 1 | Light-responsive element | |
TCT-motif | TCTTAC | 2 | Part of a light-responsive element | |
chs-CMA1a | TTACTTAA | 1 | Part of a light-responsive element | |
rbcS-CMA7a | GTCGATAAGG | 1 | Part of a light-responsive element | |
PmBEAT36 | AE-box | AGAAACAA | 2 | Part of a module for light response |
Box 4 | ATTAAT | 2 | Part of a conserved DNA module involved in light responsiveness | |
G-box | CACGAC | 1 | Cis-acting regulatory element involved in light responsiveness | |
GACACGTAGT | 1 | |||
GTGGC-motif | GATTCTGTGGC | 1 | Part of a light-responsive element | |
HSE | AAAAAATTTC | 3 | Cis-acting element involved in heat-stress responsiveness | |
AGAAAATTCG | 1 | Â | ||
L-box | ATCCCACCTAC | 1 | Part of a light-responsive element | |
Sp1 | GGGCGG | 1 | Light-responsive element | |
TCT-motif | TCTTAC | 2 | Part of a light-responsive element | |
PmBEAT37 | AT1-motif | AATTATTTTTTATT | 1 | Part of a light-responsive module |
ATCT-motif | AATCTGATCG | 1 | Part of a conserved DNA module involved in light responsiveness | |
Box 4 | ATTAAT | 2 | Part of a conserved DNA module involved in light responsiveness | |
Box I | TTTCAAA | 2 | Light-responsive element | |
CATT-motif | GCATTC | 1 | Part of a light-responsive element | |
G-box | CACGAC | 1 | Cis-acting regulatory element involved in light responsiveness | |
GAG-motif | GGAGATG | 1 | Part of a light-responsive element | |
AGAGAGT | 2 | Â | ||
PmBEAT37 | GATA-motif | GATAGGG | 1 | Part of a light-responsive element |
HSE | AAAAAATTTC | 1 | Cis-acting element involved in heat-stress responsiveness | |
I-box | GATAGGG | 1 | Part of a light-responsive element | |
L-box | ATCCCACCTAC | 1 | Part of a light-responsive element | |
LTR | CCGAAA | 2 | Cis-acting element involved in low-temperature responsiveness | |
Sp1 | CC(G/A)CCC | 4 | Light-responsive element | |
TCT-motif | TCTTAC | 3 | Part of a light-responsive element | |
chs-CMA1a | TTACTTAA | 2 | Part of a light-responsive element |
