Table 4 Details of the number of nucleotide-leucine rich repeat (NLR) receptors, receptor-like kinases (RLK) and receptor-like proteins (RLP) within 1 Mbp either side of the most significant marker on Fragaria vesca Hawaii 4 v1.1 for the quantitative trait loci (QTL) identified in the bi-parental cross and preliminary genome-wide association study (GWAS)
Name/linkage group | Most significant SNP marker | Location on Fragaria vesca v1.1 (bp) | Number of genes within 1 Mbp either side of most significant SNP in Fragaria vesca v1.1 | |||
|---|---|---|---|---|---|---|
NLR | RLK | RLP | ||||
Major effect QTL from bi-parental cross | FaRPc6C | Affx-88882258 | 21,039,403 | 1 | 5 | 0 |
FaRPc6D | Affx-88880166 | 15,257,362 | 1 | 1 | 6 | |
FaRPc7D | Affx-88902178 | 21,972,447 | 6 | 9 | 0 | |
Putative QTL from preliminary GWAS | LG5D | Affx-88859864 | 2,411,572 | 4 | 10 | 1 |
LG7A | Affx-88897773 | 14,759,809 | 7 | 8 | 2 | |
Affx-88897860 | 14,946,159 | 10 | 8 | 2 | ||
LG7D | Affx-88900641 | 19,557,035 | 15 | 12 | 1 | |
