Table 1 Statistics and annotated analysis of the cauliflower genome assembly
Number | Size | Sequence coverage (X) | Percentage | |
|---|---|---|---|---|
Estimate of genome size | 603.04 Mb | |||
PacBio reads | 69.06 Gb | 114.52 | ||
Illumina reads | 45.99 Gb | 76.26 | ||
Total reads | 115.05 Gb | 190.78 | ||
Contigs | 1,484 | 584.60 Mb | ||
Coverage of sequenced genome | 96.94 % | |||
N50 of contigs | 82 | 2.11 Mb | ||
Longest contig | 9.81 Mb | |||
GC content | 36.76 % | |||
Total repetitive sequences | 331.20 Mb | 56.65 % | ||
Total protein-coding genes | 47,772 | 108.40 Mb | 18.54 % | |
Annotated protein-coding genes | 46,628 | 97.60 % | ||
Average length per gene (exon + intron) | 2,035 bp | |||
Average exons per gene | 4.78 | 242 bp | ||
Average length per intron | 260 bp | |||
Noncoding RNAs | 8,106 | 1.32 Mb | 0.23 % |
