Fig. 5: Genome wide differences between Cucurbita pepo subsp. pepo and subsp. ovifera.

Differences in a number of SNPs, b frequency of the alternative allele (allele not present in the reference genome), c genetic differentiation, d nucleotide diversity, and e linkage disequilibrium between Cucurbita pepo subsp. pepo and subsp. ovifera along the chromosomes. Vertical dashed lines indicate the end/beginning of a chromosome. Solid horizontal line marks the absence of differences