Table 1 RNA sequencing data and corresponding quality control information
Sample | Raw Reads | Clean Reads | Clean Bases (G) | Error Rate (%) | Q20 (%) | Q30 (%) | GC Content (%) |
|---|---|---|---|---|---|---|---|
SrW-10-DAP-1 | 48182826 | 47528796 | 7.13 | 0.02 | 97.31 | 92.46 | 44.44 |
SrW-10-DAP-2 | 55137270 | 54423292 | 8.16 | 0.02 | 97.27 | 92.43 | 44.55 |
SrW-10-DAP-3 | 51336756 | 50749952 | 7.61 | 0.02 | 96.86 | 91.51 | 44.47 |
SrW-18-DAP-1 | 43412584 | 42284100 | 6.34 | 0.02 | 97.3 | 92.48 | 44.54 |
SrW-18-DAP-2 | 55231986 | 54005996 | 8.1 | 0.02 | 96.92 | 91.66 | 44.45 |
SrW-18-DAP-3 | 49853826 | 48583956 | 7.29 | 0.02 | 97.34 | 92.62 | 44.37 |
SrW-26-DAP-1 | 51969624 | 50987032 | 7.65 | 0.02 | 97.32 | 92.56 | 44.81 |
SrW-26-DAP-2 | 61879656 | 60922818 | 9.14 | 0.02 | 97.14 | 92.14 | 44.42 |
SrW-26-DAP-3 | 52478428 | 51496238 | 7.72 | 0.02 | 97.2 | 92.22 | 44.48 |
SrW-34-DAP-1 | 55758804 | 54620744 | 8.19 | 0.02 | 97.19 | 92.24 | 44.22 |
SrW-34-DAP-2 | 58035794 | 57123994 | 8.57 | 0.02 | 97.33 | 92.52 | 44.25 |
SrW-34-DAP-3 | 53535056 | 52656194 | 7.9 | 0.02 | 97.27 | 92.44 | 44.12 |
SwtW-10-DAP-1 | 54604124 | 53720332 | 8.06 | 0.02 | 97.29 | 92.52 | 44.5 |
SwtW-10-DAP-2 | 49493794 | 48856014 | 7.33 | 0.02 | 97.08 | 92.03 | 44.37 |
SwtW-10-DAP-3 | 55005720 | 54233580 | 8.14 | 0.02 | 97.21 | 92.29 | 44.6 |
SwtW-18-DAP-1 | 61711222 | 60749998 | 9.11 | 0.02 | 97.37 | 92.65 | 44.34 |
SwtW-18-DAP-2 | 45632140 | 44865534 | 6.73 | 0.02 | 97.41 | 92.71 | 44.39 |
SwtW-18-DAP-3 | 61597858 | 59575252 | 8.94 | 0.02 | 97.28 | 92.45 | 44.38 |
SwtW-26-DAP-1 | 61892510 | 60571612 | 9.09 | 0.02 | 97.17 | 92.21 | 44.15 |
SwtW-26-DAP-2 | 59389180 | 58397668 | 8.76 | 0.02 | 97.08 | 92.03 | 44.26 |
SwtW-26-DAP-3 | 48156512 | 47044710 | 7.06 | 0.02 | 97.2 | 92.3 | 44.24 |
SwtW-34-DAP-1 | 53999022 | 53054908 | 7.96 | 0.02 | 97.33 | 92.52 | 44.1 |
SwtW-34-DAP-2 | 56646000 | 55534476 | 8.33 | 0.02 | 97.11 | 92.1 | 44.15 |
SwtW-34-DAP-3 | 58827286 | 56987568 | 8.55 | 0.02 | 97.17 | 92.19 | 44.08 |
