Fig. 1: Characterization of sRNA-Seq data obtained from developing seeds of Phaseolus vulgaris at 10, 20, 30, and 40 days after anthesis (DAA). | Horticulture Research

Fig. 1: Characterization of sRNA-Seq data obtained from developing seeds of Phaseolus vulgaris at 10, 20, 30, and 40 days after anthesis (DAA).

From: MicroRNAs expression dynamics reveal post-transcriptional mechanisms regulating seed development in Phaseolus vulgaris L.

Fig. 1: Characterization of sRNA-Seq data obtained from developing seeds of Phaseolus vulgaris at 10, 20, 30, and 40 days after anthesis (DAA).The alternative text for this image may have been generated using AI.

a Length distribution of mappable sRNA reads found expressed. b Percentage of the total amount of normalized reads for miRNA families expressed. The percentage was calculated as the sum of the average normalized reads of the miRNAs in each family, at each timepoint, divided by the total average normalized reads for all known miRNAs at that timepoint. c Heatmap depicting known and new miRNAs expression profiles. The heatmap was made using the average normalized read number for each miRNA at each timepoint. Pearson as distance measurement method and Complete Linkage as clustering method were applied. Letters A to F refers to the six major miRNA abundance clusters with different abundance profiles along SD. d Molecular interaction network of expressed miRNAs. The normalized read values from sRNA-Seq data were used on the correlation analysis. Only significant (P-value ≤ 0.05) correlations higher than 0.75 or lower than −0.75 are depicted. MiRNAs were used as source nodes (white circles) and the color of the lines (edges) are red for a positive correlation or blue for negative correlation

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