Table 1 Statistics for the final genome assembly of I. indigotica

From: A chromosome-scale genome assembly of Isatis indigotica, an important medicinal plant used in traditional Chinese medicine

 

I. indigotica genome (PacBio + Hi-C)

Sequencing platform

PacBio Sequel

Assembly size (bp)

293,875,465

GC %

38.18

Number of scaffolds

810

Scaffold N50 size (bp)

36,165,591

Scaffold N90 size (bp)

87,397

Number of contigs

1199

Contig N50 size (bp)

1,176,212

Contig N90 size (bp)

75,736

Gap %

0.01

Longest sequence length (bp)

38,253,781