Table 1 The statistical results of Hi-C assembly
From: Chromosome-scale assembly of the Kandelia obovata genome
Assembly | Size (bp) |
|---|---|
Illumina sequencing assembly | |
Scaffold N50 | 279,548 |
Scaffold N90 | 28,239 |
Longest Scaffold | 1,696,757 |
Total Scaffold length | 178,438,058 |
PacBio sequencing assembly | |
Contig N50 | 5,743,053 |
Contig N90 | 2,939,642 |
Longest Contig | 13,452,090 |
Total Contig length | 177,986,124 |
BUSCO | 97.3% |
Hi-C assembly | |
Scaffold N50 | 10,026,007 |
Scaffold N90 | 7,500,541 |
Longest Contig | 13,797,742 |
Total Contig length | 178,014,124 |
