Fig. 2: Quantitative trait locus hotspots for the F2-104 population from the CC-48 × PC-101 cross.

Zoomed-in depiction of QTL hotspots of HTS (green), PH (yellow), OLL (light blue), OLPL (gray), HLvL (purple), HWe (dark blue), and HLPL (orange) on A04, A05, A06, A08, and A09 by the IM analysis method. QTL hotspots determined by the CIM analysis method are highlighted by the red color bar. SNPs with different (p < 0.05) allelic polymorphisms between different phenotype bulk enrichment regions in linkage groups are marked by color diamonds