Fig. 3: Chromosome 12 sequence polymorphisms identified from comparison of whole-genome resequencing alignments for 6 flat and 4 globe UF/IFAS breeding lines. | Horticulture Research

Fig. 3: Chromosome 12 sequence polymorphisms identified from comparison of whole-genome resequencing alignments for 6 flat and 4 globe UF/IFAS breeding lines.

From: Identification and characterization of GLOBE, a major gene controlling fruit shape and impacting fruit size and marketability in tomato

Fig. 3

Select polymorphisms that were used for marker development, and all polymorphisms within the 392 Kbp fine mapped interval (indicated by the box) for the globe locus are displayed. Physical positions (bp) are displayed along the left of the figure and correspond to version SL4.0 of the Heinz 1706 genome assembly. Loci corresponding to markers used for mapping and fine mapping are indicated by brackets. Location of polymorphisms relative to annotated genes are displayed to the right and are indicated by: P = within the promoter region, corresponding to approximately 1.0 Kbp upstream of the annotated gene; Int = within an intron of the annotated gene; Ex = within an exon of the annotated gene; Inter = located intergenically

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