Table 3 The expansion and contraction of orthogroups between R. rugosa and R. chinensis
Family | R. rugosa | R. chinensis | Expansion or contraction | Annotation |
|---|---|---|---|---|
OG0000000 | 338 | 7 | 331 | Ribonuclease H-like superfamily |
OG0000172 | 60 | 0 | 60 | Retroviridae gag-proteins |
OG0000013 | 80 | 24 | 56 | Ribonuclease H-like superfamily |
OG0000189 | 55 | 1 | 54 | Retroviridae gag-proteins |
OG0000016 | 74 | 20 | 54 | Ribonuclease H-like superfamily |
OG0000055 | 69 | 18 | 51 | Ribonuclease H-like superfamily |
OG0000044 | 63 | 14 | 49 | DNA/RNA polymerases superfamily protein |
OG0000180 | 48 | 9 | 39 | DNAse I-like superfamily protein |
OG0000250 | 42 | 4 | 38 | Cysteine-rich receptor-like protein kinase |
OG0000516 | 39 | 1 | 38 | Zinc knuckle (CCHC-type) family protein |
OG0000177 | 47 | 10 | 37 | Ribonuclease H-like superfamily |
OG0000564 | 37 | 0 | 37 | Ribonuclease H-like superfamily |
OG0000174 | 43 | 7 | 36 | Cysteine-rich receptor-like protein Kinase |
OG0000517 | 38 | 2 | 36 | Ribonuclease H-like superfamily |
OG0000126 | 40 | 5 | 35 | Cysteine-rich receptor-like protein kinase |
OG0000098 | 45 | 10 | 35 | DNA/RNA polymerases Superfamily protein |
OG0000652 | 36 | 1 | 35 | Ribonuclease H-like superfamily |
OG0000384 | 35 | 1 | 34 | Cysteine-rich RECEPTOR-like kinase |
OG0000028 | 59 | 25 | 34 | MuDR family transposase |
OG0000052 | 44 | 10 | 34 | Ribonuclease H-like superfamily |
OG0000116 | 46 | 14 | 32 | WUS/WUSCHEL |
OG0000869 | 32 | 1 | 31 | NB-ARC domain-containing Disease resistance protein |
OG0000100 | 36 | 5 | 31 | Ribonuclease H-like superfamily |
OG0000514 | 35 | 4 | 31 | Ribonuclease H-like superfamily |
OG0000288 | 32 | 3 | 29 | zinc knuckle (CCHC-type) family protein |
OG0001051 | 0 | 31 | −31 | IBR domain-containing protein |
OG0000450 | 3 | 35 | −32 | NB-ARC domain-containing Disease resistance protein |
OG0000020 | 22 | 54 | −32 | TIR-NBS-LRR class |
OG0000762 | 1 | 34 | −33 | NB-ARC domain-containing Disease resistance protein |
OG0000761 | 0 | 35 | −35 | NB-ARC domain-containing Disease resistance protein |
OG0000049 | 31 | 66 | −35 | TIR-NBS-LRR class |
OG0000709 | 0 | 36 | −36 | NB-ARC domain-containing Disease resistance protein |
OG0000650 | 0 | 37 | −37 | Aldolase superfamily protein |
OG0000041 | 21 | 63 | −42 | Nuclease |
OG0000147 | 1 | 47 | −46 | ANTHRANILATE SYNTHASE BETA SUBUNIT 1 |
OG0000325 | 0 | 48 | −48 | Aminotransferase-like, plant mobile domain family protein |
OG0000009 | 13 | 66 | −53 | Leucine-rich repeat (LRR) family |
