Table 1 Assembly and annotation of the H. undatus genome

From: A chromosome-scale genome sequence of pitaya (Hylocereus undatus) provides novel insights into the genome evolution and regulation of betalain biosynthesis

Estimated genome size (Gb)

1.58

Assembled genome size (Gb)

1.41

Number of scaffolds (≥2 kb)

675

Number of N50 scaffolds

6

N50 scaffold length (Mb)

127.15

Number of contigs (≥2 kb)

7,647

Number of N50 contigs

670

Longest chr (Mb)

146

GC content (%)

36.9

Transposable elements (%)

64.8

Predicted protein-coding genes

27,735

Average gene length (bp)

5,045.63

Average exon length (bp)

229.22

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