Table 1 List of 35 selected genes related to cell growth, water and sugar transport sorted by absolute difference in Syrah G versus P

From: Transcripts switched off at the stop of phloem unloading highlight the energy efficiency of sugar import in the ripening V. vinifera fruit

VCost.V3	RefSeq	Syrah G (CPM)	Syrah P (CPM)	Syrah S (CPM)	Variation Syrah (%)	Difference Syrah	Rank Syrah	Annotation
Vitvi05g01947	LOC100264738	5380	974	376	−93	−5003.9	1	Early nodulin-75-like
Vitvi04g00442	LOC100252479	4387	720	241	−95	−4146.8	2	Uncharacterised
Vitvi02g00310	LOC100233001	4818	1336	814	−83	−4004.5	3	[Aquaporin] VviPIP1-3
Vitvi16g01800	LOC100232884	8635	6627	5693	−34	−2941.5	4	[Cell wall - SWITCH] invertase/pectin methylesterase inhibitor
Vitvi13g00605	LOC100233002	2773	971	462	−83	−2311.3	5	[Aquaporin] VviPIP2-5
Vitvi18g00189	LOC100245385	2812	1299	751	−73	−2061.0	8	[Cell wall] Expansin A (VvEXPA19)
Vitvi13g00172	LOC100244917	1941	414	161	−92	−1780.1	13	[Cell wall] Expansin A (VvEXPA14)
Vitvi18g00056	LOC100232977	1609	345	302	−81	−1307.6	21	[Sugar] Tonoplast Monosaccharide Transporter HT6
Vitvi05g00953	LOC100232902	1143	72	17	−98	−1125.5	24	[Cell wall] Pectate lyase
Vitvi08g01038	LOC100233094	1045	105	74	−93	−971.6	26	[Aquaporin] VviPIP2-3
Vitvi12g02137	LOC100233113	1185	499	250	−79	−934.2	27	[Cell wall] Pectin methylesterase
Vitvi06g01329	LOC100265471	1947	1129	1070	−45	−876.4	29	[Cell wall - SWITCH] xyloglucan endotransglucosylase/hydrolase 32
Vitvi04g00465	LOC100254408	1092	388	308	−72	−783.6	32	[Cell wall] Cellulose synthase CESA1
Vitvi08g01602	LOC100233004	823	163	101	−88	−721.4	34	[Aquaporin] VviTIP1-2
Vitvi05g00548	LOC100245945	605	52	45	−93	−559.8	40	Sulfate transporter 3.1
Vitvi15g01110	LOC100240701	827	360	322	−61	−504.8	47	[Aquaporin] VviPIP1-4
Vitvi17g00070	LOC100267921	511	71	48	−91	−462.8	52	[Sugar] bidirectional sugar transporter SWEET10
Vitvi15g00643	LOC100253046	1015	413	554	−45	−460.7	53	[Cell wall - SWITCH] Expansin B (VvEXPB04)
Vitvi03g00247	LOC100264011	594	212	143	−76	−451.2	55	[Sugar] Tonoplast Monosaccharide Transporter TMT2
Vitvi18g00008	LOC100242715	441	80	72	−84	−369.5	72	[Cell wall] Cellulose synthase CESA2
Vitvi03g00155	LOC100233027	434	139	70	−84	−363.9	73	[Aquaporin] VviPIP2-7
Vitvi11g00272	LOC100233140	541	259	177	−67	−363.6	74	Malate dehydrogenase (NADP+)
Vitvi04g01668	LOC100232854	1434	786	1084	−24	−350.1	78	Alcohol dehydrogenase 2
Vitvi16g00713	LOC100256970	351	24	15	−96	−335.9	82	[Sugar] Vacuolar Invertase GIN1
Vitvi14g01977	LOC100244103	297	2	3	−99	−294.2	93	[Cell wall] Expansin A (VvEXPA16)
Vitvi18g00397	LOC100232961	333	119	52	−84	−280.7	105	[Sugar] Hexose transporter HT2
Vitvi03g00209	LOC100258952	286	35	25	−91	−260.4	113	[Cell wall] Expansin A-like (VvEXLA01)
Vitvi18g01628	LOC100255463	351	133	106	−70	−245.8	124	[Cell wall] Cellulose synthase CESA2
Vitvi11g00835	LOC100248411	277	102	47	−83	−229.9	131	[Cuticle metabolism] CER3-like - Aliphatic wax
Vitvi12g00721	LOC100242544	237	9	9	−96	−227.4	134	Fasciclin-like arabinogalactan protein 2
Vitvi13g00255	LOC100233003	245	48	32	−87	−213.6	143	[Aquaporin] VviTIP1-3
Vitvi13g01731	LOC100256811	289	126	133	−54	−156.0	186	Cellulose synthase CESA3
Vitvi01g01805	LOC100232906	157	7	3	−98	−153.9	189	Xyloglucan endotransglucosylase/hydrolase protein B
Vitvi17g01251	LOC100261426	136	7	2	−99	−134.2	225	Expansin A (VvEXPA18)
Vitvi06g00281	LOC100233093	126	23	12	−91	−113.9	281	[Aquaporin] VviPIP2-4

Gene ID is reported as VCost.V3 and RefSeq code. Gene expression is expressed as count per million (CPM)

Back to article page

Table 1 List of 35 selected genes related to cell growth, water and sugar transport sorted by absolute difference in Syrah G versus P

Search

Quick links