Extended Data Fig. 1: Comparison of F. esculentum PL4 pseudomolecules with linkage map.

Left grey bars indicate the PL4 pseudomolecules and right grey bars indicate linkage maps from Yabe et al.¹⁶. Positions of the array markers developed by the same previous study are shown by black lines. Markers where the order matches between the pseudomolecules and the linkage map are connected by blue lines, and those that do not match are connected by red lines. The thickness of the lines is proportional to the number of markers. The marker on P1_3 (FE140468) that is anchored to Chr1 is connected by a red dotted line. The map position of S locus, which contains the S-ELF3 gene, is 84.2 cM on the linkage map of Yabe et al.¹⁶. S^h denotes the locus containing the homologue of S-ELF3 which has a nonsense mutation in F. esculentum PL4 (see also Supplementary Fig. 30). We note that the notations of P1_8.1 and P1_8.2 are incorrectly interchanged in the Figure 2 of Yabe et al.¹⁶.