Extended Data Fig. 7: Comparison of GNSR expression in immunity and signalling mutants to inoculated and axenic A. thaliana Col-0 wild-type.
From: Plant microbiota feedbacks through dose-responsive expression of general non-self response genes
(A) Heatmap of log2FCs of GNSR genes (y-axis) in mutant plant lines (x-axis) upon colonization by Arthrobacter Leaf137 or Pseudomonas Leaf15 relative to wild-type plants under the same treatment condition, showing altered expression levels in bak1-5 bkk1 and rbohD rbohF. (B) Heat map of log2FCs of GNSR genes (y-axis) in axenic mutant plant lines (x-axis) relative to axenic wild-type plants, showing altered basal GNSR expression in bak1-5 bkk1 and to a lesser extent in rbohD rbohF even in absence of bacteria. (A, B) Genes were filtered for P-value ≤ 0.01 (two-sided Wald test with Benjamini-Hochberg correction). Color indicates extent of induction as indicated by respective color key. Conditions clustered by Ward’s method. Data from n = 5 independent experiments, each comprising 18 pooled plants per condition, sampled at nine days post inoculation.
