Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Research Briefing
  • Published:

Mechanism of RNA primer removal in plastid DNA replication

The factors involved in the removal of RNA primers during plastid DNA (ptDNA) replication have been unclear. We now identify a plastid-localized 5′–3′ exonuclease (PEN1) that mediates the removal of RNA primers in ptDNA replication and provide structural insight into its mechanism of action in this process.

This is a preview of subscription content, access via your institution

Access options

Buy this article

USD 39.95

Prices may be subject to local taxes which are calculated during checkout

Fig. 1: PEN1 mediates RNA primer removal in ptDNA replication.

References

  1. Al-Behadili, A. et al. A two-nuclease pathway involving RNase H1 is required for primer removal at human mitochondrial OriL. Nucleic Acids Res. 46, 9471–9483 (2018). This paper reports the functions of human ribonuclease H1 (RNase H1).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Yang, Z. et al. RNase H1 cooperates with DNA gyrases to restrict R-loops and maintain genome integrity in Arabidopsis chloroplasts. Plant Cell 29, 2478–2497 (2017). This paper reports the functions of A. thaliana RNase H1.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Morley, S. A., Ahmad, N. & Nielsen, B. L. Plant organelle genome replication. Plants 8, 358 (2019). This review article describes the mechanisms of plant organelle DNA replication.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

This is a summary of: Huang, X. et al. PEN1 catalyses RNA primer removal during plastid DNA replication in maize. Nat. Plants https://doi.org/10.1038/s41477-025-02027-4 (2025).

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Mechanism of RNA primer removal in plastid DNA replication. Nat. Plants 11, 1233–1234 (2025). https://doi.org/10.1038/s41477-025-02038-1

Download citation

  • Published:

  • Version of record:

  • Issue date:

  • DOI: https://doi.org/10.1038/s41477-025-02038-1

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing