Table 1 Genes of the pyrimidine metabolism specifically upregulated in biofilm cells.

From: Biofilm formation displays intrinsic offensive and defensive features of Bacillus cereus

 

Log2 (fold-change)

Gene ID

24 h

48 h

72 h

Function. Gene name

iTRAQ

BC0325

2.41

2.56

−4.27

Purine biosynthesis pathway. Adenylosuccinate lyase

*

BC0326

3.13

3.87

−0.69

Purine biosynthesis pathway. Phosphoribosylaminoimidazole-succinocarboxamide synthase

*

BC0327

3.09

3.37

−0.66

Purine biosynthesis pathway. Phosphoribosylformylglycinamidine synthase subunit PurS

*

BC0328

2.91

3.37

−0.80

Purine biosynthesis pathway. Phosphoribosylformylglycinamidine synthase I

*

BC0329

2.37

3.17

−1.16

Purine biosynthesis pathway. Phosphoribosylformylglycinamidine synthase II

*

BC0330

2.64

3.91

0.40

Purine biosynthesis pathway. Amidophosphoribosyltransferase

*

BC0331

2.96

3.52

−1.96

Purine biosynthesis pathway. Phosphoribosylaminoimidazole synthetase

*

BC0332

4.01

3.68

−1.38

Purine biosynthesis pathway. Phosphoribosylglycinamide formyltransferase

*

BC3882

3.66

−0.38

−0.07

Pyrimidine biosynthesis pathway. Orotate phosphoribosyltransferase

*

BC3883

3.73

0.65

0.84

Pyrimidine biosynthesis pathway. Orotidine 5'-phosphate decarboxylase

 

BC3884

4.14

1.06

1.54

Pyrimidine biosynthesis pathway. Dihydroorotate dehydrogenase 1B

 

BC3885

4.18

0.98

1.12

Pyrimidine biosynthesis pathway. Dihydroorotate dehydrogenase electron transfer subunit

 

BC3886

4.29

0.22

0.95

Pyrimidine biosynthesis pathway. Carbamoyl phosphate synthase large subunit

*

BC3887

3.40

1.19

0.66

Pyrimidine biosynthesis pathway. Carbamoyl phosphate synthase small subunit

 

BC3888

5.69

2.74

2.27

Pyrimidine biosynthesis pathway. Dihydroorotase

 

BC3889

4.87

1.78

0.26

Pyrimidine biosynthesis pathway. Aspartate carbamoyltransferase

 
  1. Asterisk indicates confirmed behavior at protein levels