Table 1 Summary of identified viruses that probably infected or are associated with PPNs

(-)ssRNA

Unclassified bunyaviruses

Potato rot nematode bunyavirus 1

PRNBYV1-L

PV640383

12,325

Ditylenchus destructor

SRR28892574

WWV90583 MAG: RNA polymerase, partial [Riboviria sp.]

56%

30%

0

Unclassified bunyaviruses

Potato rot nematode bunyavirus 2

PRNBYV2-L

PV640384

12,018

Ditylenchus destructor

SRR28892574

WWV90583 MAG: RNA polymerase, partial [Riboviria sp.]

59%

29%

0

Unclassified bunyaviruses

Soybean cyst nematode bunya-like virus

SCNBLV-L

BK071874

9452

Heterodera glycines

SRR6269844

AVK42877 RNA-dependent RNA polymerase [Soybean cyst nematode bunya-like virus]

100%

100%

0

Unclassified bunyaviruses

Soybean cyst nematode associated bunya-like virus 2

SCNBLV2-L

BK071875

4800

Unknown

SRR9647096

QJD26146 polymerase [Schistocephalus solidus bunya-like virus]

73%

37%

0

Unclassified bunyaviruses

Potato rot nematode bunyavirus 3

PRNBYV3-L

PV640385

6809

Ditylenchus destructor

SRR28892574

QJD26146 polymerase [Schistocephalus solidus bunya-like virus]

85%

31%

0

Unclassified bunyaviruses

Cereal cyst nematode associated bunya-like virus 1

CCNBYV1-L

BK071886

4809

Unknown

SRR5942326

QJD26146 polymerase [Schistocephalus solidus bunya-like virus]

96%

32%

0

Phenuiviridae

Potato rot nematode bunyavirus 5

PRNBYV5-L

PV640391

7100

Ditylenchus destructor

SRR28892574

WPV71150 MAG: RNA-dependent RNA polymerase [Ips phenui-like virus 2]

90%

32%

0

Phenuiviridae

Potato rot nematode bunyavirus 4

PRNBYV4-L

PV640386

7101

Ditylenchus destructor

SRR28892574

WPV71150 MAG: RNA-dependent RNA polymerase [Ips phenui-like virus 2]

87%

32%

0

Phenuiviridae

Potato rot nematode bunyavirus 6

PRNBYV6-L

PV640395

7456

Ditylenchus destructor

SRR28892574

WPV62171 MAG: RNA-dependent RNA polymerase [Wenzhou rodent phenuivirus 1]

85%

35%

0

Phenuiviridae

Potato rot nematode associated bunyavirus 7

PRNBYV7-L

PV640397

2393

Unknown

SRR28892574

DBA56479 TPA_asm: RNA-dependent RNA polymerase [Coptotermes formosanus phenuivirus 1]

86%

31%

1.02E-94

Phenuiviridae

Potato rot nematode associated bunyavirus 8

PRNBYV8-L

PV640398

2473

Unknown

SRR28892574

UYL95518 RNA-dependent RNA polymerase [Tonghua tick virus 1]

85%

25%

2E-37

Phenuiviridae

Soybean cyst nematode associated rice stripe virus

SCNRSV-L

BK071878

8839

Heterodera glycines

SRR13711083

AEF56735 RNA dependent RNA polymerase, partial [Soybean cyst nematode associated rice stripe virus]

73%

100%

0

Phenuiviridae

Soybean cyst nematode associated rice stripe virus

SCNRSV-S

BK071879

1175

Heterodera glycines

SRR13711083

AAP06149 SJCHGC04696 protein, partial [Schistosoma japonicum]

34%

30%

0.004

Phenuiviridae

Soybean cyst nematode associated Uukuniemi virus

SCNUUKV-L

BK071880

6630

Heterodera glycines

SRR6269844

AEF56734 RNA dependent RNA polymerase, partial [Soybean cyst nematode associated Uukuniemi virus]

100%

98%

0

Phenuiviridae

Soybean cyst nematode associated Uukuniemi virus

SCNUUKV-M

BK071881

3372

Heterodera glycines

SRR6269844

QCO84580 glycoprotein, partial [Austropotamobius brown spot virus]

75%

25%

1.92E-57

Phenuiviridae

Soybean cyst nematode associated Uukuniemi virus

SCNUUKV-S

BK071882

1469

Heterodera glycines

SRR6269844

YP_010086152 nucleoprotein [Rukutama virus]

74%

33%

1.28E-23

Phenuiviridae

Soybean cyst nematode associated bunya-like virus 3

SCNBLV3-L

BK071876

4545

Unknown

SRR6230579

AQW38600 RNA-dependent RNA polymerase [Sugar beet cyst nematode virus 2]

95%

33%

0

Phenuiviridae

Soybean cyst nematode associated bunya-like virus 3

SCNBLV3-S

BK071877

1769

Unknown

SRR6230579

QPN53432 N protein [Mourilyan virus]

80%

23%

1.2E-11

Rhabdoviridae

Potato cyst nematode rhabdovirus 1

PCNRHV1

BK071890

13,675

Globodera pallida

ERR202422

WAK29061 RNA dependent RNA polymerase [Potato cyst nematode rhabdovirus]

100%

100%

0

Rhabdoviridae

Soybean cyst nematode rhabdvirus 1

SCNRHV1

BK071888

11,472

Heterodera glycines

SRR9647098

WAK29061 RNA dependent RNA polymerase [Potato cyst nematode rhabdovirus]

99%

45%

0

Rhabdoviridae

Soybean cyst nematode rhabdvirus 2

SCNRHV2

BK071889

7640

Heterodera glycines

SRR9647098

WAK29061 RNA dependent RNA polymerase [Potato cyst nematode rhabdovirus]

99%

57%

3.59E-176

Rhabdoviridae

Potato rot nematode rhabdovirus 1

PRNRHV1

PV640399

13,218

Ditylenchus destructor

SRR28892574

WAK29061 RNA dependent RNA polymerase [Potato cyst nematode rhabdovirus]

99%

41%

0

Rhabdoviridae

Soybean cyst nematode associated northern cereal mosaic virus

SCNNCMV

BK071887

12,737

Heterodera glycines

SRR6232817

AEF56733 putative RNA-dependent RNA polymerase [Soybean cyst nematode associated northern cereal mosaic virus]

100%

100%

0

Nyamiviridae

Sugar beet cyst nematode nyami-like virus 1

SBCNNV1

BK071894

12,400

Heterodera schachtii

SRR16675965

AVK42876 RNA dependent RNA polymerase, partial [Soybean cyst nematode nyami-like virus]

30%

99%

0

Nyamiviridae

Socyvirus heteroderae

SCNMidV1

BK071893

11,476

Globodera pallida

SRR6269845

YP_009052467 putative RNA dependent RNA polymerase [Socyvirus heteroderae]

100%

99%

0

Nyamiviridae

Soybean cyst nematode nyami-like virus 1

SCNNV1

BK071891

11,690

Heterodera glycines

SRR6269844

AVK42865 RNA-dependent RNA polymerase [Soybean cyst nematode nyami-like virus]

100%

100%

0

Nyamiviridae

Soybean cyst nematode nyami-like virus 2

SCNNV2

BK071892

8690

Heterodera glycines

SRR9647098

AVK42865 RNA-dependent RNA polymerase [Soybean cyst nematode nyami-like virus]

100%

89%

0

Nyamiviridae

Stem and bulb nematode nyami-like virus 1

SBNNV1

BK071895

4613

Ditylenchus dipsaci

SRR8239758

AVK42865 RNA-dependent RNA polymerase [Soybean cyst nematode nyami-like virus]

94%

32%

0

Yueviridae

Potato rot nematode yue-like virus 1

PRNYV1-RNA1

PV640400

6411

Ditylenchus destructor

SRR28892574

YP_009337854 RNA-dependent RNA polymerase [Shahe yuevirus-like virus 1]

99%

29%

0

Yueviridae

Potato rot nematode yue-like virus 1

PRNYV1-RNA2

PV640401

1589

Ditylenchus destructor

SRR28892574

UNI74148 MAG: hypothetical protein [brine shrimp yue-like virus 2]

49%

36%

3.94E-27

Yueviridae

Potato rot nematode yue-like virus 2

PRNYV2-RNA1

PV640402

5932

Ditylenchus destructor

SRR28892574

QNS31060 putative RNA dependent RNA polymerase [Thrips tabaci associated yue-like virus 1]

87%

27%

5.41E-172

Yueviridae

Potato rot nematode yue-like virus 2

PRNYV2-RNA2

PV640403

3074

Ditylenchus destructor

SRR28892574

No significant hit

Yueviridae

Potato rot nematode yue-like virus 2

PRNYV2-RNA3

PV640404

3043

Ditylenchus destructor

SRR28892574

No significant hit

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 1a

SCNYV1a-RNA1

BK071896

6582

Heterodera glycines

SRR6232824

QNS31060 putative RNA dependent RNA polymerase [Thrips tabaci associated yue-like virus 1]

91%

26%

1.02E-173

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 1a

SCNYV1a-RNA2

BK071897

3225

Heterodera glycines

SRR6232824

No significant hit

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 1b

SCNYV1b-RNA1

BK071898

6144

Heterodera glycines

SRR9647096

QNS31060 putative RNA dependent RNA polymerase [Thrips tabaci associated yue-like virus 1]

92%

26%

1.87E-174

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 1b

SCNYV1b-RNA2

BK071899

3210

Heterodera glycines

SRR9647096

No significant hit

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 2

SCNYV2-RNA1

BK071900

6321

Heterodera glycines

SRR6230585

QNS31060 putative RNA dependent RNA polymerase [Thrips tabaci associated yue-like virus 1]

86%

27%

5.45E-162

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 2

SCNYV2-RNA2

BK071901

3285

Heterodera glycines

SRR6230585

No significant hit

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 3

SCNYV3-RNA1

BK071902

6654

Heterodera glycines

SRR6230586

QNS31060 putative RNA dependent RNA polymerase [Thrips tabaci associated yue-like virus 1]

90%

26%

2.42E-160

Unclassified Goujianvirales

Soybean cyst nematode yue-like virus 3

SCNYV3-RNA2

BK071903

3219

Heterodera glycines

SRR6230586

No significant hit

Qinviridae

Potato rot nematode qin-like virus 1

PRNQV1-RNA1

PV640405

6034

Ditylenchus destructor

SRR28892574

YP_009345119 RNA-dependent RNA polymerase [Xinzhou nematode virus 3]

70%

34%

0

Qinviridae

Potato rot nematode qin-like virus 1

PRNQV1-RNA2

PV640406

2425

Ditylenchus destructor

SRR28892574

YP_009345120 hypothetical protein [Xinzhou nematode virus 3]

64%

27%

3.46E-28

Qinviridae

Potato cyst nematode qin-like virus 1

PCNQV1-RNA1

BK071904

5787

Globodera rostochiensis

SRR16693885

YP_009345119 RNA-dependent RNA polymerase [Xinzhou nematode virus 3]

70%

34%

0

Qinviridae

Potato cyst nematode qin-like virus 1

PCNQV1-RNA2

BK071905

2261

Globodera rostochiensis

SRR16693885

WKY10110 hypothetical protein Q1695_002454 [Nippostrongylus brasiliensis]

85%

28%

1E-31

Orthomyxoviridae

Potato cyst nematode orthomyxo-like virus 1

PCNOV1-PB1

BK071906

2368

Globodera rostochiensis

ERR1173512

AVM87619 PB1, partial [Wenling orthomyxo-like virus 2]

82%

40%

3.5E-138

Orthomyxoviridae

Potato cyst nematode orthomyxo-like virus 1

PCNOV1-PB2

BK071907

2325

Globodera rostochiensis

ERR1173512

No significant hit

Orthomyxoviridae

Potato cyst nematode orthomyxo-like virus 1

PCNOV1-GP

BK071908

2211

Globodera rostochiensis

ERR1173512

MCP4487896 DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]

70%

21%

2.26E-10

Orthomyxoviridae

Potato cyst nematode orthomyxo-like virus 1

PCNOV1-PA

BK071909

2140

Globodera rostochiensis

ERR1173512

QOQ34656 PA protein [Thogotovirus thogotoense]

47%

27%

1.7E-19

Orthomyxoviridae

Potato cyst nematode orthomyxo-like virus 1

PCNOV1-NP

BK071910

2004

Globodera rostochiensis

ERR1173512

No significant hit

Orthomyxoviridae

Bursaphelenchus mucronatus orthomyxo-like virus 1

BMOV1-PB1

BK071911

2405

Bursaphelenchus mucronatus

SRR7062725

AVM87619 PB1, partial [Wenling orthomyxo-like virus 2]

81%

41%

1.04E-151

Orthomyxoviridae

Bursaphelenchus mucronatus orthomyxo-like virus 1

BMOV1-PB2

BK071912

2545

Bursaphelenchus mucronatus

SRR7062725

No significant hit

Orthomyxoviridae

Bursaphelenchus mucronatus orthomyxo-like virus 1

BMOV1-GP

BK071913

2263

Bursaphelenchus mucronatus

SRR7062725

MCP4487896 DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]

31%

24%

0.0001

Orthomyxoviridae

Bursaphelenchus mucronatus orthomyxo-like virus 1

BMOV1-PA

BK071914

2266

Bursaphelenchus mucronatus

SRR7062725

YP_010840364 PA polymerase subunit [Upolu virus]

44%

24%

0.00000001

Orthomyxoviridae

Bursaphelenchus mucronatus orthomyxo-like virus 1

BMOV1-NP

BK071915

2368

Bursaphelenchus mucronatus

SRR7062725

No significant hit

(+)ssRNA

Nodaviridae

Santeuil nodavirus

SANTV-RNA1

PV640420

3677

Unknown

SRR28892574

YP_004221742 RNA dependent RNA polymerase [Santeuil nodavirus]

99%

96%

0

Nodaviridae

Santeuil nodavirus

SANTV-RNA2

PV640421

2653

Unknown

SRR28892574

YP_004221743 capsid protein [Santeuil nodavirus]

100%

96%

0

Nodaviridae

Lulong nodavirus

LLNDV-RNA1

PV640422

3452

Unknown

SRR28892574

UHM27590 MAG: RNA-dependent RNA polymerase, partial [Sanya nodavirus 1]

69%

32%

3.65E-105

Nodaviridae

Lulong nodavirus

LLNDV-RNA2

PV640423

2476

Unknown

SRR28892574

WKV33363 MAG: RNA-dependent RNA polymerase [Riboviria sp.]

47%

34%

1.76E-22

Endornaviridae

Potato rot nematode endornavirus 1a

PRNEV1a

PV640407

14,218

Ditylenchus destructor

SRR28892574

CAH2618724.1 polyprotein [Krauss’ spikemoss associated endorna-like virus]

78%

32%

0

Endornaviridae

Potato rot nematode endornavirus 1b

PRNEV1b

PV640408

14,105

Ditylenchus destructor

SRR28892574

CAH2618724.1 polyprotein [Krauss’ spikemoss associated endorna-like virus]

78%

32%

0

Endornaviridae

Potato rot nematode endornavirus 1c

PRNEV1c

PV640409

11,147

Ditylenchus destructor

SRR28892574

QUA12642.1 polyprotein, partial [Phytophthora cactorum alphaendornavirus 3]

74%

27%

5.33E-162

Unclassified Martellivirales

Soybean cyst nematode associated virga-like virus 1

SCNVV1

BK071916

8997

Heterodera glycines

SRR9647096

YP_009333242 RdRP [Beihai charybdis crab virus 1]

56%

35%

9.17E-137

Unclassified Martellivirales

Sugar beet cyst nematode associated virga-like virus 1

SBCNVV1

BK071918

5961

Unknown

SRR16675965

QWC36507 polyprotein [Bemisia tabaci bromo-like virus 1]

69%

38%

4.27E-78

Unclassified Martellivirales

Bursaphelenchus mucronatus associated virga-like virus 1

BMVV1

BK071917

9651

Unknown

SRR7062723

UTQ50504.1 polyprotein [Plant associated tobamo-like virus 1]

27%

37%

3E-87

Tymoviridae

Potato cyst nematode associated tymovirus 1

PCNTV1

BK071919

8724

Globodera pallida

ERR202430

QQG34657 replicase, partial [Sinomenium acutum tymovirus 1]

78%

33%

1.53E-153

Tombusviridae

Potato cyst nematode associated tombus-like virus 1

PCNTomV1

BK071977

4223

Unknown

SRR1873823

USC30247 MAG: putative RNA dependent RNA polymerase, partial [Tombusviridae sp.]

49%

83%

0

Tombusviridae

Soybean cyst nematode associated tombus-like virus 1

SCNTomV1

BK071978

4300

Unknown

SRR6269844

WRQ65088 RNA-dependent RNA polymerase, partial [Tolivirales sp.]

70%

70%

0

Flaviviridae

Soybean cyst nematode virus 5

SCNV5

BK071920

18,835

Heterodera glycines

SRR9647098

YP_009028573 polyprotein [Soybean cyst nematode virus 5]

99%

94%

0

Flaviviridae

Cereal cyst nematode Jingmen virus 1

CCNJMV1-NS5

BK071921

3392

Heterodera avenae

SRR5942326

QPG92984 NS5 protein [Jingmen tick virus]

84%

32%

2.11E-124

Flaviviridae

Cereal cyst nematode Jingmen virus 1

CCNJMV1-NS3

BK071922

3006

Heterodera avenae

SRR5942326

QPG92986 NS3 protein [Jingmen tick virus]

68%

29%

5.2E-42

Flaviviridae

Cereal cyst nematode Jingmen virus 1

CCNJMV1-GP1

BK071923

2636

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus 1

CCNJMV1-GP2

BK071924

1962

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus 2

CCNJMV2-NS5

BK071925

3399

Heterodera avenae

SRR5942326

QPG92984 NS5 protein [Jingmen tick virus]

79%

34%

4.67E-123

Flaviviridae

Cereal cyst nematode Jingmen virus 2

CCNJMV2-NS3

BK071926

3031

Heterodera avenae

SRR5942326

ACF19855 ANT-34 [Toxocara canis]

63%

28%

8.12E-38

Flaviviridae

Cereal cyst nematode Jingmen virus 2

CCNJMV2-GP

BK071927

3115

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus 3

CCNJMV3-NS5

BK071928

3131

Heterodera avenae

SRR5942326

UXD80086 putative RdRP [Lasius neglectus virus 4]

87%

31%

3.72E-95

Flaviviridae

Cereal cyst nematode Jingmen virus 3

CCNJMV3-NS3

BK071929

3048

Heterodera avenae

SRR5942326

UXD80087 hypothetical protein [Lasius neglectus virus 4]

76%

27%

4.26E-42

Flaviviridae

Cereal cyst nematode Jingmen virus 3

CCNJMV3-GP

BK071930

2737

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus 4

CCNJMV4-NS5

BK071931

701

Heterodera avenae

SRR5942326

UYO08033 RNA-dependent RNA polymerase [Amarillovirales sp.]

98%

32%

2.94E-30

Flaviviridae

Cereal cyst nematode Jingmen virus 4

CCNJMV4-NS3

BK071932

1788

Heterodera avenae

SRR5942326

UXD80087 hypothetical protein [Lasius neglectus virus 4]

76%

26%

1.93E-29

Flaviviridae

Cereal cyst nematode Jingmen virus 4

CCNJMV4-GP

BK071933

3472

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP1

BK071934

1680

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP2

BK071935

1629

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP3

BK071936

3119

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP4

BK071937

1741

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP5

BK071938

1630

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP6

BK071939

1663

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Cereal cyst nematode Jingmen virus

CCNJMV-UnCP7

BK071940

1663

Heterodera avenae

SRR5942326

No significant hit

Flaviviridae

Potato cyst nematode Jingmen virus 1

PCNJMV1-NS5

BK071941

3405

Globodera rostochiensis

ERR1173512

QHD64751 NS5 [Plasmopara viticola lesion associated Jingman-like virus 1]

82%

32%

2.93E-128

Flaviviridae

Potato cyst nematode Jingmen virus 1

PCNJMV1-NS3

BK071942

3097

Globodera rostochiensis

ERR1173512

ACF19855 ANT-34 [Toxocara canis]

62%

34%

2.68E-59

Flaviviridae

Potato cyst nematode Jingmen virus 1

PCNJMV1-GP

BK071943

3308

Globodera rostochiensis

ERR1173512

No significant hit

Flaviviridae

Potato cyst nematode Jingmen virus 1

PCNJMV1-CP

BK071944

1560

Globodera rostochiensis

ERR1173512

No significant hit

Flaviviridae

Potato cyst nematode Jingmen virus 2

PCNJMV2-NS5

BK071945

3373

Globodera rostochiensis

ERR202480

QPG92984 NS5 protein [Jingmen tick virus]

83%

33%

1.19E-124

Flaviviridae

Potato cyst nematode Jingmen virus 2

PCNJMV2-NS3

BK071946

3072

Globodera rostochiensis

ERR202480

ACF19855 ANT-34 [Toxocara canis]

61%

32%

2.17E-54

Flaviviridae

Potato cyst nematode Jingmen virus 2

PCNJMV2-GP

BK071947

3013

Globodera rostochiensis

ERR202480

No significant hit

Flaviviridae

Potato cyst nematode Jingmen virus 2

PCNJMV2-CP

BK071948

1686

Globodera rostochiensis

ERR202480

No significant hit

Flaviviridae

Sugar beet cyst nematode Jingmen virus 1

SBCNJMV1-NS5

BK071949

2655

Heterodera schachtii

SRR16675965

KAK6042405 flavivirus RNA-directed RNA polymerase [Cooperia oncophora]

69%

39%

3.66E-131

Flaviviridae

Sugar beet cyst nematode Jingmen virus 1

SBCNJMV1-NS3

BK071950

3201

Heterodera schachtii

SRR16675965

ACF19855 ANT-34 [Toxocara canis]

61%

31%

2E-54

Flaviviridae

Sugar beet cyst nematode Jingmen virus 1

SBCNJMV1-GP

BK071951

3225

Heterodera schachtii

SRR16675965

No significant hit

Flaviviridae

Sugar beet cyst nematode Jingmen virus 1

SBCNJMV1-CP

BK071952

1670

Heterodera schachtii

SRR16675965

No significant hit

Marnaviridae

Root-knot nematode associated marnavirus 1

RKNMV1

BK071953

9005

Meloidogyne incognita

SRR17756052

XCM67804 MAG: polyprotein [Picornavirales sp.]

97%

59%

0

Marnaviridae

Root-knot nematode associated marnavirus 2a

RKNMV2a

BK071954

6873

Meloidogyne incognita

SRR17756052

QKQ15130 hypothetical protein 1 [Forsythia suspensa marnavirus]

59%

79%

0

Marnaviridae

Root-knot nematode associated marnavirus 2b

RKNMV2b

BK071955

7559

Meloidogyne incognita

SRR13844590

QKQ15130 hypothetical protein 1 [Forsythia suspensa marnavirus]

63%

74%

0

Marnaviridae

Potato cyst nematode associated marnavirus 1

PCNMV1

BK071956

5062

Globodera rostochiensis

SRR1873812

UNY42079 MAG: polyprotein 1, partial [Picornavirales sp.]

99%

77%

0

Marnaviridae

Potato cyst nematode associated marnavirus 2

PCNMV2

BK071957

2494

Globodera rostochiensis

SRR1873812

ULF99940 MAG: hypothetical protein [Marnaviridae sp.]

99%

49%

0

Marnaviridae

Rice root-knot nematode associated marnavirus 1

RRKNMV1

BK071958

7362

Meloidogyne graminicola

ERR1744941

ULF99981 MAG: hypothetical protein 1 [Marnaviridae sp.]

99%

50%

0

Marnaviridae

Cereal cyst nematode associated marnavirus 1

CCNMV1

BK071959

9038

Heterodera avenae

SRR5588564

UNY42137 MAG: polyprotein, partial [Picornavirales sp.]

92%

44%

0

Dicistroviridae

Root-knot nematode associated dicistro-like virus 1

RKNDicV1

BK071960

8484

Meloidogyne incognita

SRR7601332

XCO49623 MAG: putative ORF1 protein, partial [Picornavirales sp.]

41%

45%

0

Dicistroviridae

Root-knot nematode associated dicistro-like virus 2

RKNDicV2

BK071961

9130

Meloidogyne incognita

SRR17756052

XCO49623 MAG: putative ORF1 protein, partial [Picornavirales sp.]

41%

62%

0

Dicistroviridae

Root-knot nematode associated dicistro-like virus 3

RKNDicV3

BK071962

6863

Meloidogyne incognita

SRR17756052

ULF99688 MAG: nonstructural protein [Picornavirales sp.]

99%

37%

0

Dicistroviridae

Root-knot nematode associated dicistro-like virus 4

RKNDicV4

BK071963

8289

Meloidogyne incognita

SRR17756052

UQR78684 nonstructural polyprotein [Striga asiatica dicistro-like virus 1]

100%

82%

0

Dicistroviridae

Root-knot nematode associated dicistro-like virus 5

RKNDicV5

BK071964

6066

Meloidogyne incognita

SRR17756053

AWK77898 nonstructural polyprotein, partial [Perth bee virus 4]

100%

74%

0

Dicistroviridae

Root-knot nematode associated dicistro-like virus 6

RKNDicV6

BK071965

8075

Meloidogyne incognita

SRR17756052

AWK77898 nonstructural polyprotein, partial [Perth bee virus 4]

91%

74%

0

Dicistroviridae

Potato cyst nematode associated dicistro-like virus 1

PCNDicV1

BK071999

6370

Unknown

SRR17221743

XCM67876 MAG: nonstructural polyprotein [Picornavirales sp.]

70%

37%

7E-142

Dicistroviridae

Potato cyst nematode associated dicistro-like virus 2

PCNDicV2

BK072000

3677

Unknown

SRR1873812

XHA87884.1 polyprotein [Qianjiang dicistro-like virus 91]

99%

36%

0

Unclassified picornavirus

Cereal cyst nematode picorna-like virus 1a

CCNPV1a

BK071967

8536

Heterodera avenae

SRR5942326

AVK42881 polyprotein [Potato cyst nematode picorna-like virus]

82%

29%

1.32E-160

Unclassified picornavirus

Cereal cyst nematode picorna-like virus 1b

CCNPV1b

BK071968

8536

Heterodera avenae

SRR5942326

AVK42881 polyprotein [Potato cyst nematode picorna-like virus]

82%

29%

2.99E-161

Unclassified picornavirus

Cereal cyst nematode picorna-like virus 1c

CCNPV1c

BK071969

5396

Heterodera avenae

SRR5942326

WWV87039 MAG: polyprotein, partial [Picornaviridae sp.]

81%

27%

8.96E-136

Unclassified picornavirus

Cereal cyst nematode picorna-like virus 2

CCNPV2

BK071970

4830

Heterodera avenae

SRR5942326

AVK42881 polyprotein [Potato cyst nematode picorna-like virus]

96%

27%

3.4E-123

Unclassified picornavirus

Root lesion nematode virus

RLNV

BK071971

8596

Pratylenchus penetrans

SRR2962755

AYX41642 polyprotein [Root lesion nematode virus]

100%

100%

0

Unclassified picornavirus

Sugar beet cyst nematode virus 1

SBCNV1

BK071966

9515

Heterodera schachtii

SRR16675965

YP_009553470.1 [Sugar beet cyst nematode virus 1]

100%

99%

0

Unclassified picornavirus

Potato cyst nematode picorna-like virus 1

PCNPV1

BK071972

9351

Globodera rostochiensis

ERR1173512

AVK42881 polyprotein [Potato cyst nematode picorna-like virus]

100%

100%

0

Unclassified picornavirus

Potato cyst nematode picorna-like virus 2

PCNPV2

BK071973

8270

Globodera rostochiensis

ERR202481

AVK42881 polyprotein [Potato cyst nematode picorna-like virus]

100%

92%

0

Astroviridae

Potato cyst nematode associated astro-like virus 1

PCNAstV1

BK071974

6837

Unknown

SRR1873815

WZH61648 RNA-dependent RNA polymerase, partial [Sopicug virus]

72%

28%

3.98E-42

Astroviridae

Potato cyst nematode associated astro-like virus 2

PCNAstV2

BK071975

4484

Unknown

SRR1873815

UQB75990 RNA-dependent RNA polymerase [Flumine Astrovirus 8]

70%

22%

4E-13

Astroviridae

Soybean cyst nematode associated astro-like virus 1

SCNAstV1

BK071976

5531

Unknown

SRR9647099

WRQ64769 RNA-dependent RNA polymerase, partial [Patatavirales sp.]

43%

27%

2.6E-28

Unclassified Bormycovirales

Potato rot nematode associated ormycovirus 1

PRNOrmV1-RNA1

PV640412

3322

Ditylenchus destructor

SRR28892574

USW07198 putative RNA-dependent RNA polymerase [Plasmopara viticola lesion-associated ormycovirus 6]

67%

36%

1.14E-134

Unclassified Bormycovirales

Potato rot nematode associated ormycovirus 1

PRNOrmV1-RNA2

PV640413

1725

Ditylenchus destructor

SRR28892574

No significant hit

Unclassified Bormycovirales

Potato rot nematode associated ormycovirus 1

PRNOrmV1-RNA3

PV640414

2061

Ditylenchus destructor

SRR28892574

No significant hit

Unclassified Bormycovirales

Soybean cyst nematode associated ormycovirus 3

SCNOrmV3-RNA1

BK071989

3535

Unknown

SRR9647096

USW07198 putative RNA-dependent RNA polymerase [Plasmopara viticola lesion-associated ormycovirus 6]

61%

37%

2.15E-127

Unclassified Bormycovirales

Soybean cyst nematode associated ormycovirus 3

SCNOrmV3-RNA2a

BK071990

2608

Unknown

SRR9647096

No significant hit

Unclassified Bormycovirales

Soybean cyst nematode associated ormycovirus 3

SCNOrmV3-RNA2b

BK071991

2159

Unknown

SRR9647096

No significant hit

Unclassified Bormycovirales

Rice root-knot nematode associated ormycovirus 1

RRKNOrmV1-RNA1

BK071983

3299

Unknown

ERR4288691

XDO01625 RNA-dependent RNA polymerase [Phytophthora cinnamomi ormycovirus 7-5]

45%

29%

3.74E-29

Unclassified Bormycovirales

Rice root-knot nematode associated ormycovirus 1

RRKNOrmV1-RNA2

BK071984

2026

Unknown

ERR4288691

No significant hit

Unclassified Bormycovirales

Reniform nematode associated ormycovirus 1

RNOrmV1-RNA1

BK071994

3520

Rotylenchulus reniformis

ERR744557

XDO01625 RNA-dependent RNA polymerase [Phytophthora cinnamomi ormycovirus 7-5]

50%

24%

4.61E-26

Unclassified Bormycovirales

Reniform nematode associated ormycovirus 1

RNOrmV1-RNA2

BK071995

2336

Rotylenchulus reniformis

ERR744557

No significant hit

Unclassified Bormycovirales

Reniform nematode associated ormycovirus 2

RNOrmV2-RNA1

BK071996

3368

Rotylenchulus reniformis

ERR744557

XDO01625 RNA-dependent RNA polymerase [Phytophthora cinnamomi ormycovirus 7-5]

54%

23%

3.94E-27

Unclassified Bormycovirales

Reniform nematode associated ormycovirus 2

RNOrmV2-RNA2

BK071997

2268

Rotylenchulus reniformis

ERR744557

No significant hit

Unclassified Bormycovirales

Soybean cyst nematode associated ormycovirus 1

SCNOrmV1-RNA1

BK071985

3391

Heterodera glycines

SRR13711080

XDO01625 RNA-dependent RNA polymerase [Phytophthora cinnamomi ormycovirus 7-5]

55%

23%

4.13E-21

Unclassified Bormycovirales

Soybean cyst nematode associated ormycovirus 1

SCNOrmV1-RNA2

BK071986

2660

Heterodera glycines

SRR13711080

No significant hit

Unclassified Bormycovirales

Potato rot nematode associated ormycovirus 3

PRNOrmV3-RNA1

PV640417

715

Unknown

SRR28892574

XDO01621 RNA-dependent RNA polymerase [Phytophthora cinnamomi ormycovirus 5-2]

97%

27%

2.13E-11

Unclassified Bormycovirales

Potato rot nematode associated ormycovirus 3

PRNOrmV3-RNA2

PV640418

1843

Unknown

SRR28892574

No significant hit

Deltaormycoviridae

Soybean cyst nematode associated ormycovirus 4

SCNOrmV4-RNA1

BK071992

2712

Unknown

SRR6269845

WPV08068 MAG: RNA-dependent RNA polymerase [Verticillium dahliae ormycovirus 1]

82%

30%

1.07E-81

Deltaormycoviridae

Soybean cyst nematode associated ormycovirus 4

SCNOrmV4-RNA2

BK071993

1424

Unknown

SRR6269845

WPV08069 MAG: hypothetical protein [Verticillium dahliae ormycovirus 1]

90%

27%

4.94E-19

Alphaormycoviridae

Potato rot nematode associated ormycovirus 2

PRNOrmV2-RNA1

PV640415

3183

Unknown

SRR28892574

USW07195 putative RNA-dependent RNA polymerase [Erysiphe lesion-associated ormycovirus 1]

36%

28%

1.28E-29

Alphaormycoviridae

Potato rot nematode associated ormycovirus 2

PRNOrmV2-RNA2

PV640416

1599

Unknown

SRR28892574

No significant hit

Alphaormycoviridae

Soybean cyst nematode associated ormycovirus 2

SCNOrmV2-RNA1

BK071987

3102

Unknown

SRR9647098

USW07195 putative RNA-dependent RNA polymerase [Erysiphe lesion-associated ormycovirus 1]

49%

25%

3.05E-29

Alphaormycoviridae

Soybean cyst nematode associated ormycovirus 2

SCNOrmV2-RNA2

BK071988

2081

Unknown

SRR9647098

No significant hit

Alphaormycoviridae

Potato cyst nematode associated ormycovirus 1

PCNOrmV1-RNA1

BK071981

2024

Unknown

ERR202480

USW07200 putative RNA-dependent RNA polymerase [Downy mildew lesion associated ormycovirus 1]

70%

26%

1E-20

Alphaormycoviridae

Potato cyst nematode associated ormycovirus 1

PCNOrmV1-RNA2

BK071982

1884

Unknown

ERR202480

No significant hit

Alphaormycoviridae

Potato rot nematode associated ormycovirus 4

PRNOrmV4-RNA1

BK071979

3131

Unknown

SRR7943144

No significant hit

Alphaormycoviridae

Potato rot nematode associated ormycovirus 4

PRNOrmV4-RNA2

BK071980

1667

Unknown

SRR7943144

No significant hit

dsRNA

Birnaviridae

Potato rot nematode birnavirus 1

PRNBiV1-segmentB

PV640411

2694

Ditylenchus destructor

SRR28892574

QBS55241 polyprotein, partial [Tetranychus urticae-associated entomobirnavirus]

78%

36%

1.1E-121

Birnaviridae

Potato rot nematode birnavirus 1

PRNBiV1-segmentA

PV640410

3340

Ditylenchus destructor

SRR28892574

YP_010086266 RNA-dependent RNA polymerase [Lates calcarifer birnavirus]

85%

26%

1.32E-60

Amalgaviridae

Potato rot nematode associated amalga-like virus 1

PRNAmaV1

PV640419

3312

Unknown

SRR28892574

DAZ85680 TPA_asm: fusion protein [Physcomitrium patens amalgavirus 1]

88%

40%

0

Amalgaviridae

Soybean cyst nematode associated amalga-like virus 1

SCNAmaV1

BK071998

3911

Unknown

SRR9647096

DAZ85680 TPA_asm: fusion protein [Physcomitrium patens amalgavirus 1]

92%

42%

0