Table 1 The list of ASR genes and their functional pathways.

From: Adaptive stress response genes associated with breast cancer subtypes and survival outcomes reveal race-related differences

Pathway

ASR genes

XIAP

XIAP, SPANXA1, SPANXB1, SPANXC, SULT1E1, SLPI, AGFG2, POPDC3, ZIC1, CDC45, TNFSF9, SLC26A6, KYNU, H2BC11, MCM5, GINS2, CDKN2D, OBSL1, SNAI1, TP53I3, AIM2, LIG1, PIMREG, ALDOC, MCM10,ASF1B, ZNF165, CDKN1C, H2AC8, TMEM40, DBP, SLCO1B3, E2F8, LRP4, KLRC1, RALGDS, BLM, CCNE2, POLE2, ZNF26, PITPNC1, NEU1, VASH2, PLAU, GLYR1, H2BC21, NRN1, TBC1D3, COPZ2, H2BC8, KLRC2, RPL5, SEPTIN6, CRYBG3, PRR16, WDR37, TBC1D3C, FOSB, ASTE1, CLCN6, PDE4DIP, N4BP2L1, LEF1, HSPG2, POLA1, WBP1L, ZMYM5, B3GNT2, DHFR, ZNF331, ACSM3, MANSC1, ARAP2, TMEM100, SLC1A4, GPR137B, LIPG, LMAN1, LPAR6, SNX19, CYP4B1, GEM, ARHGAP29, ZFPM2, SLC14A1, PCDH7, HSD11B1, CAVIN2, ABAT, STC1, NRIP3, NAT1, PCDH9, LMAN2L, REXO5, DLEU2L, DLEU2, SYBU, MRM2, LINC-PINT, LINC00115

OSR

HSPA1A, METTL7A, BLM, TYMS, KRT6B, LIG1, SCD5, POLE2, CDT1, CCNE2, SKP2, E2F8, ORC1, MCM4, CCN3, IRF4, MCM10, NAP1L3, MCM3, ASF1B, FGF2, TREM1, ABCA6, CTH, ECM2, OASL, CEBPD, TP63, RAB5A, SLC4A7, MBNL2, RBMS3, KLHL24, TXNIP, FCAR, AREG, ANXA3, PTGS2, NRG1, INHBE

NFkB

NFKB1, RELA, IL6, CXCL8, IRF2, FAS, IL1B, BCL2, BIRC5, SOD1, MYC

MNK

MKNK1, MKNK2, EIF4G1, EIF4E, SPRY2, HNRNPA1, HNRNPA2B1, NONO, KAT5, RPS6

Immune

CTSA, PNP, MYCBP2, TMC6, IFI44L, NUDT1, MELK, STAT4, INHBC, ARPC2, EHD1, SART3, MBD4, ACOX1, PRKCB, NFATC3, FOLR1, MAK16, WNK1, JMJD6, IQGAP1, ABCC10, SRSF7, IGLV1-44, NUP85, SEPTIN6, ESF1, NAA15, PGS1, ANKRD11, TNPO1, PAX5, DHFR, CTBP2, BCKDK, PEX11B, CUL2, GABPB1, ATP7A, ATF2, DNAJB6, CANX, PAK2, ANXA7, TMCO1, PBXIP1, SP3, TGIF2, TOMM22, INTS12, SLC30A5, TMEM50B, TSPAN14, TBL1XR1, MRM2

TGFβ

TGFB1, NDUFAF3, DAB2, RPL27A, MARCKS, CD72, HSP90B1, PPARD, ACTG1, CRK, TGFB2, AUTS2, RYK, TGIF2

JAG1-Notch

JAG1, NOTCH1, DLL4, BRD4, IL6, IL1B, TNF, SNAI1, ZEB1

  1. The ASR genes were grouped according to their function in the listed pathways. The ASR genes that are bolded represent the genes belonging to more than one of the indicated pathways.