Table 1 Machine-learning-based SPECT dopaminergic imaging studies for PD diagnosis and early detection.

From: Mining imaging and clinical data with machine learning approaches for the diagnosis and early detection of Parkinson’s disease

Study

Sample

Data features

Methods

Main findings

Other findings

Acton and Newberg, 200615

81 PD, 94 HC

Striatum images of from [99mTc]TRODAT-1 SPECT images

Feature selection: Down-sample voxels in the striatum; Classification: ANN; Validation: Leave-one-out

Classification accuracy: 94.4%

ANN performed better than semi-quantitative ROI analysis (81.3%) and radiologists (88%); Difficult to interpret what ANN detect in the image

Hamilton et al., 200670

18 PD (12 advanced PD, 6 early PD with ET)

Striatal uptake ratios (striatum-to-occipital cortex ratio and putamen-to-caudate tracer accumulation ratio) from 123I-FP-CIT SPECT images

Feature selection: none; Classification: ANN; Validation: Leave-one-out

Classification accuracy: 100%

Putamen-to-caudate tracer accumulation ratio is able to discriminate between PD and ET

Palumbo et al., 201071

261 PD (89 ET, 64 early PD, 63 advanced PD)

Striatal uptake and uptake ratios (putamen/occipital, caudate/occipital) from (123)I-FP-CIT SPECT images

Feature selection: Down-sample voxels in the striatum; Classification: PNN and CIT; Validation: 50-fold-cross-validation

Classification accuracy: For PNN: Early PD: 81.9 ± 8.1%; Advanced PD: 78.9 ± 8.1%; ET: 96.6 ± 2.6%

CIT provided reliable cut-off values (e.g., 5.99 at putamen and 6.97 at caudate); Classification accuracy: For CIT: Early PD: 69.8 ± 5.3%; Advanced PD: 88.1%±8.8%; ET: 93.5 ± 3.4%

Illan et al., 201244

108 PD, 100 HC

Striatal uptake image with normalized high intensity from 123I-ioflupane SPECT images

Feature selection: Applied a mask for high-intensity voxels; Classification: SVM, KNN, NM; Validation: Leave-one-third-out

Classification accuracy: AUC: 0.968 for SVM; 0.931 for KNN; 0.942 for NM

Classifier selection had higher impact on classification results than the preprocessing steps; Image preprocessing with voxel intensity normalized to a maximum value performed the best

Segovia et al., 201245

95 PD, 94 HC

Striatal uptake with high intensity from 123I-ioflupane SPECT images

Feature selection: PLS and down-sampling; Classification: SVM; Validation: Leave-one-out

Classification accuracy: 94.7% (AUC: 0.968)

PLS + SVM outperformed previous approaches based on singular value decomposition

Martinez-Murcia et al., 201447

158 PD, 111 HC

Computed Haralick texture features (via a gray-level co-occurrence matrix) from 123I-ioflupane SPECT images

Feature selection: none; Classification: SVM; Validation: Leave-one-out

Classification accuracy: 97.4%

 

Palumbo et al., 201446

56 PD, 34 non-PD

Uptake in the caudate (CL, CR) and putamen (PL, PR) from 123I-FP-CIT SPECT

Feature selection: none; Classification: SVM; Validation: Leave-one-out; fivefold cross-validation

Classification accuracy: CL + CR + PL + PR: 90.6% (leave-one-out); 90.7% (fivefold cross-validation)

Adding age improved classification accuracy (95.6%)

Prashanth et al., 201416

369 early PD, 179 HC (from PPMI)

Striatal binding ratios from 123I-Ioflupane SPECT images

Feature selection: none; Classification: SVM; Validation: tenfold cross-validation

Classification accuracy: 96.14 ± 1.89%

SVM with non-linear kernel of radial basis function achieved higher classification accuracy than SVM with linear kernel (92%)

Oliveira and Castelo-Branco, 201587

445 early PD, 209 HC (from PPMI)

Binding potential at each voxel in the striatum as feature extracted from 123I-ioflupane SPECT images

Feature selection: Apply BP threshold; Classification: SVM; Validation: Leave-one-out

Classification accuracy: 97.86%

The classification results were robust regardless the reference VOI used or the transformation used (for spatial normalization), or the way the features selected

Hirschauer et al., 201537

189 PD, 62 SWEDD, 415 HC (from PPMI)

Motor and non-motor clinical features such as motor function and olfactory loss and imaging biomarkers such as ioflupane (123I) SPECT striatal-binding ratios

Feature selection: none; Classification: EPNN, PNN, SVM, KNN and CT; Validation: tenfold cross-validation

Classification accuracy: PD vs. HC: 98.6% (EPNN), 98.2% (KNN), 98.1% (SVM); PD vs. SWEDD: 95.3% (EPNN), 94.6% (KNN), 89.3% (SVM)

Classification accuracy: SWEDD vs. HC: 92% (EPNN), 91.6% (KNN), 89.3% (SVM)

Huertas-Fernández et al., 201566

80 VP, 164 PD

Uptake in the striatum and whole brain from 123I-ioflupane SPECT images

Feature selection: t-test and Mann–Whitney test for the important features; Classification: LR, LDA, SVM; Validation: tenfold cross-validation

Classification accuracy: 90.3 ± 5.8% (LR for ROI approach); 90.4 ± 5.9% (SVM for voxel-based whole-brain approach)

Classification accuracy: 89.8 ± 6.5% (LDA for ROI), 89.9 ± 4.9% (SVM for ROI); 88.7 ± 4.9% (LR for voxel-based) 88.4 ± 6.4% (LDA for voxel-based)

Prashanth et al., 201617

401 early PD, 183 HC (from PPMI)

Non-motor clinical features such as RBD and olfactory loss, CSF measurements and SPECT imaging markers (striatal-binding ratios)

Feature selection: none; Classification: SVM, random forests; Validation: tenfold cross-validation

Classification accuracy: 96.40 ± 1.08% for SVM, 96.18 ± 1.27% for random forests

SVM outperformed other classifiers; Combined features (non-motor clinical features and CSF and imaging markers) are useful for early detection of PD

Choi et al., 201718

431 PD, 77 SWEDD, 193 HC (from PPMI); SNUH data: 72 PD, 10 HC

Striatal binding ratios and other imaging features from SPECT images

Feature selection: none; Classification: Deep CNN; Validation: tenfold cross-validation

Classification accuracy: 96% (PPMI); 98.8% (SNUH)

The performance of PD Net (deep CNN) was comparable to that of experts; SWEDD could be reclassified by PD Net

Prashanth et al., 201788

427 early PD, 80 SWEDD, 208 HC (from PPMI)

Shape and surface-fitting-based features, striatal-binding ratios from SPECT images

Feature selection: Estimate feature importance with random forest; Classification: SVM, random forests; Validation: tenfold cross-validation

Classification accuracy (early PD vs. non-PD (SWEDD/HC)): 97.29 ± 0.11% for SVM, 96.9 ± 0.17% for random forests

SVM outperformed other classifiers; Shape and surface-fitting-based features showed higher importance than striatal-binding ratios for classification

Wang et al., 201748

369 PD,165 NC (from PPMI). [93 AD, 202 MCI, 101 HC (from ADNI)]

PPMI: Striatal blinding ratios from SPECT images; Gray matter, white matter, and CSF volumes of ROIs from MRI images; ADNI: Gray matter volume of the ROIs from MRI images; mean intensity of ROIs from PET images

Feature selection: Optimization in progressive transductive learning; Classification: SVM, GTL; Validation: tenfold cross-validation

Classification accuracy: PPMI (PD vs. HC): SVM: 88.5% (MRI + SPECT); GTL: 97.4% (MRI + SPECT); ADNI (AD vs. HC): SVM: 86.7 ± 1.42% (MRI + PET); GTL: 92.6 ± 0.65% (MRI + PET)

Multi-modal features led to better classification performance than single-modal features

Zhang and Kagen, 201749

1171 PD, 131 SWEDD, 211 HC (from PPMI)

A slice that has the highest striatal signal-to-background ratio of SPECT image was used

Feature selection: gradient descent optimization; Classification: Artificial Neural network; Validation: tenfold cross-validation

Classification accuracy: PD vs. HC: 93.8 ± 4.7%

A comparison of gradient descent and the Adagrad optimizer showed that there was no significant difference in their classification performance

Taylor and Fenner, 201719

113 non-PDD, 191 PDD (Local data); 448 PD, 209 HC (from PPMI)

Voxel intensities; Principal components of image voxel intensities; Striatal binding radios (from the putamen and caudate) from (I123) Ioflupane (FP-CIT) SPECT images

Feature selection (data dimension reduction): PCA; Classification: SVM; Validation: tenfold cross-validation

Classification accuracy: semi-quantitative methods: 78~87% (local data), 89 ~95% (PPMI); SVM: 88~92% (local data), 95 ~97% (PPMI)

Machine-learning method performed better than semi-quantitative methods

Taylor et al., 201820

304 PD (113 without PDD, 191 with PDD); 448 PD, 209 HC (from PPMI)

First five principal components of image voxel intensities in the striatum extracted from (123I)FP-CIT SPECT images

Feature selection: none; Classification: SVM; Validation: tenfold cross-validation

Classification accuracy: 92%

CADx increased the accuracy of the radiologists for research images, but had no significant change in accuracy for the clinical data and had less impact on the clinical scientist

Oliveira et al., 201889

443 early PD, 209 HC (from PPMI)

Striatum uptake ratios and striatum dimensional-based features extracted from (123I)FP-CIT SPECT images

Feature selection: none; Classification: SVM; KNN; LR; Validation: Leave-one-out cross-validation

Classification accuracy: 97.9% (SVM, all features)

SVM outperformed other classifiers such as KNN and LR; Features with high classification accuracy: the length of the striatal region (96.5%), the putaminal binding potential (95.4%) and the striatal-binding potential (93.9%)

  1. ADNI Alzheimer’s disease neuroimaging initiative, AUC area under the ROC (receiver-operating characteristic) curve, CADx computer-aided diagnosis, CIT or CT classification tree, CL caudate left, CNN convolutional neural networks, CR caudate right, CSF cerebrospinal fluid, EPNN enhanced probabilistic neural network, ET essential tremor, GLS-DBN group Lasso sparse deep belief network, GTL graph-based transductive learning, KNN k-nearest neighbor, LDA linear discriminant analysis, LR logistic regression, NM nearest mean, PCA principal component analysis, PD Parkinson’s disease, PDD pre-synaptic dopaminergic deficit, PL putamen left, PR putamen right, PLS partial least squares, PNN probabilistic neural network, PPMI Parkinson’s progression markers initiative, RBD rapid eye movement (REM) sleep behavior disorder, ROC receiver-operating characteristic, ROI region of interest, SVM support vector machine, SWEDD scans without evidence of dopaminergic deficit, VP vascular parkinsonism.