Fig. 3: Functional analysis of AGREDA_1.1 with foods available in Phenol-Explorer19. | npj Systems Biology and Applications

Fig. 3: Functional analysis of AGREDA_1.1 with foods available in Phenol-Explorer19.

From: Prediction of degradation pathways of phenolic compounds in the human gut microbiota through enzyme promiscuity methods

Fig. 3

a Frequency of input phenolic compounds added to AGREDA_1.1 in the 40 foods of Phenol-Explorer19 (F1, F2, …, F40); (b) Degradation pathway of 3-Feruloylquinic acid (3-FQA) predicted by AGREDA_1.1. 2D chemical structures were drawn using RDKit36; (c) Number of output microbial metabolites derived from the input compounds available in the 40 foods of Phenol-Explorer19 with AGREDA_1.017 and AGREDA_1.1. Source Data are provided as a Source Data file.

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