Table 1 MHC Class II-restricted H. pylori ferritin epitopes in H-2d, H-2K, HLA-DR1, and HLA-DR4 mice.

From: CD4 T cell epitope abundance in ferritin core potentiates responses to hemagglutinin nanoparticle vaccines

MHC Haplotype

Sequence derivation

Sequence

Peptide library number

HLA-DR1

Ferritin

1 MLSKDIIKLLNEQVN 15

FE1

HLA-DR1

Ferritin

5 DIIKLLNEQVNKEMN 19

FE5

-

Ferritin

9 LLNEQVNKEMNSSNL 23

FE9

HLA-DR4

Ferritin

12 EQVNKEMNSSNLYMSM 27

FE12

-

Ferritin

17 EMNSSNLYMSMSSWC 31

FE17

-

Ferritin

21 SNLYMSMSSWCYTHS 35

FE21

HLA-DR4

Ferritin

25 MSMSSWCYTHSLDGA 39

FE25

HLA-DR4

Ferritin

29 SWCYTHSLDGAGLFL 43

FE29

-

Ferritin

33 THSLDGAGLFLFDHA 47

FE33

H-2k, HLA-DR4

Ferritin

37 DGAGLFLFDHAAEEY 51

FE37

H-2k, HLA-DR4

Ferritin

41 LFLFDHAAEEYEHAK 55

FE41

H-2k

Ferritin

45 DHAAEEYEHAKKLII 59

FE45

H-2d

Ferritin

49 EEYEHAKKLIIFLNE 63

FE49

H-2d

Ferritin

53 HAKKLIIFLNENNVPV 68

FE53

-

Ferritin

57 LIIFLNENNVPVQLT 71

FE57

-

Ferritin

61 LNENNVPVQLTSISA 75

FE61

-

Ferritin

65 NVPVQLTSISAPEHK 79

FE65

-

Ferritin

69 VQLTSISAPEHKFEGL 84

FE69

-

Ferritin

73 ISAPEHKFEGLTQIF 87

FE73

-

Ferritin

77 EHKFEGLTQIFQKAY 91

FE77

-

Ferritin

81 EGLTQIFQKAYEHEQ 95

FE81

-

Ferritin

85 TQIFQKAYEHEQHISE 100

FE85

-

Ferritin

89 KAYEHEQHISESINN 103

FE89

-

Ferritin

93 HEQHISESINNIVDH 107

FE93

HLA-DR1, HLA-DR4

Ferritin

97 ISESINNIVDHAIKS 111

FE97

H-2d, H-2k, HLA-DR4

Ferritin

101 INNIVDHAIKSKDHA 115

FE101

H-2d, HLA-DR4

Ferritin

105 VDHAIKSKDHATFNF 119

FE105

-

Ferritin

109 IKSKDHATFNFLQWY 123

FE109

-

Ferritin

113 DHATFNFLQWYVAEQ 127

FE113

-

Ferritin

117 FNFLQWYVAEQHEEE 131

FE117

-

Ferritin

121 LQWYVAEQHEEEVLFK 136

FE121

-

Ferritin

125 AEQHEEEVLFKDILD 139

FE125

-

Ferritin

129 EEEVLFKDILDKIEL 143

FE129

-

Ferritin

133 LFKDILDKIELIGNE 147

FE133

-

Ferritin

137 ILDKIELIGNENHGL 151

FE137

H-2k, HLA-DR4

Ferritin

141 IELIGNENHGLYLAD 155

FE141

H-2k

Ferritin

145 GNENHGLYLADQYVK 159

FE145

H-2k, HLA-DR4

Ferritin

149 HGLYLADQYVKGIAK 163

FE149

-

Ferritin

153 LADQYVKGIAKSRKS 167

FE153

-

Ferritin

157 YVKGIAKSRKS 167

FE157