Table 1 Immunodominant epitopes detected at day 35 post-infection
Protein | Peptide pool | Peptide number | Sequence position (a.a.) | Peptide | Peptide length | CTL/Th T cell targets |
|---|---|---|---|---|---|---|
NS1 | P3 | 68 | 202–216 | SEKNDTWRLKRAHLI | 15 | Th |
69 | 205–219 | NDTWRLKRAHLIEMK | 15 | |||
P4 | 87 | 259–273 | RTQMKGPWHSEELEI | 15 | CTL | |
88 | 262–276 | MKGPWHSEELEIRFE | 15 | |||
89 | 265–279 | PWHSEELEIRFEECP | 15 | |||
NS3 | P3 | 76 | 298–312 | RGYISTRVEMGEAAA | 15 | |
NS4 | P1 | 27 | 183–200 | DLRPASAWAIYAALTTFI | 18 | |
P2 | 33 | 225–242 | GVLFGMGKGMPFYAWDFG | 18 | ||
34 | 232–249 | KGMPFYAWDFGVPLLMIG | 18 | |||
Env | P1 | 20 | 58–72 | SYCYEASISDMASDS | 15 |
