Extended Data Fig. 3: Comparison of E. coli and P. psychrophila interaction fitness values for the 874 genes found in both bacteria.
From: Bacterial–fungal interactions revealed by genome-wide analysis of bacterial mutant fitness
BLAST comparison (e-value cutoff of 1e-2) of protein sequences from P. psychrophila to those from E. coli and comparison of eggNOG gene assignments were used to find the best cross-species gene match for all genes with significant interaction fitness for at least one of the two bacterial species. A match was found for 874 genes. For each fungal condition, the fitness value of these genes with E. coli is on the x-axis and with P. psychrophila on the y-axis. In each condition, the genes are colored according to whether they have significant interaction fitness in the condition for E. coli (red), P. psychrophila (blue), both (purple), or neither (white).
