Extended Data Fig. 4: Prophage BTP1 comparisons.
From: Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa
Comparison of P22-like prophage regions identified in ST313 lineages generated using the Artemis Comparison Tool86. Red represents sequence similarity and white represents regions absent. (a) shows the comparison between P22-like prophage in ST313 L3 (strain BKQZM9) and ST313 L2 (strain D23580). Prophage annotation is adapted from that shown in Owen et al., 201733, with different colours highlighting different prophage regions. (b) shows the comparison between P22-like prophage in ST313 L3 (strain BKQZM9) and a P22-like prophage in ST313 sampled in the UK.
