Extended Data Fig. 6: The community assembly of rbohD and rbohDrbohF substantially differs from that of other PTI genotypes.
From: The plant NADPH oxidase RBOHD is required for microbiota homeostasis in leaves
The heatmap shows log2 fold-changes in strain abundance on different genotypes compared to Col-0 wild-type. Columns show endosphere and phyllosphere samples from plants inoculated with either a, SynCom-222 or b, SynCom-223 or SynCom-137. Strains (or ASVs indicated by superscript circles) are ordered and colored by phylogeny. Statistical significance of differential strain abundances was calculated with the two-sided Wald test (DESeq2 package, R) and highlighted with a black cell rectangle for p < 0.05 (n = 12; Benjamini-Hochberg adjusted).
