Extended Data Fig. 6: Transcriptional effects of STPK perturbation.
From: The Mycobacterium tuberculosis protein O-phosphorylation landscape

Volcano plots show the DEGs in STPK mutant strains, direction of change, magnitude, and P value associated with the change. Horizontal and vertical red lines show significance cutoffs (>4-fold, P < 0.01) used for further analysis of DEGs. The STPKs that were altered in the respective strain were removed from the data as they showed the largest changes and distorted the plots. Plots are shown with different scales to avoid compression of data points. Significance was determined by calculating the geometric mean of five DE tools.