Extended Data Fig. 2: DO metagenomic analysis. | Nature Microbiology

Extended Data Fig. 2: DO metagenomic analysis.

From: Genetic mapping of microbial and host traits reveals production of immunomodulatory lipids by Akkermansia muciniphila in the murine gut

Extended Data Fig. 2

a, Average percent of assembled reads across all samples. b, Comparison of percent of reads mapping to our generated assembly vs. public database (n = 297 animals). c, Microbial functions detected for KEGG pathways across all metagenomes. KEGG Orthology (KO) numbers were identified by annotating predicted ORFs to the KEGG database. d, Top 20 gut microbial genera detected across all DO mice (n = 264 animals). e, Quality of metagenome-assembled genomes. f, Two variants of A. muciniphila MAGs detected in the DO mice. Box and whisker plots denote the interquartile range, median and spread of points within 1.5 times the interquartile range, data beyond the end of the whiskers are plotted individually.

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