Extended Data Fig. 8: Flowchart to construct the reference phylogenetic tree and assign a function and taxonomic label to environmental peptides. | Nature Microbiology

Extended Data Fig. 8: Flowchart to construct the reference phylogenetic tree and assign a function and taxonomic label to environmental peptides.

From: A ubiquitous gammaproteobacterial clade dominates expression of sulfur oxidation genes across the mesopelagic ocean

Extended Data Fig. 8

SoxB is shown as an example case. In panel A, the set of SoxB peptides were first predicted in the genome database and then a reference phylogenetic tree was constructed and analyzed. Panel B depicts how SoxB is predicted in the environmental peptide sequences and a taxonomic label is assigned.

Back to article page