Table 1 Summary of terrestrial prokaryotic genome catalogues

From: Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats

Genome catalogue

Dereplicated MAGsa

HQ MAGsb

Median contigsc

Total samplesd

Original samplese

Yield (Tbp)

SPIRE

72,673

5,564

163

99,146

0

~500

RBG

22,442

1,076

193

1,286

0

17.8

SMAG

17,909

2,838

306

3,304

363

46.7f

GEM

17,406

4,806

124

10,450

0

NA

MFD-LR

15,640

4,894

20

154

154

14.4

TPMC

9,300

754

303

498

498

25.7f

MFD-SR

5,518

422

666

10,683

10,683

48.2

OWC

1,965

12

456

42

42

3.1

  1. aIncludes species-representative HQ and MQ MAGs.
  2. bHQ MAG count after standardized genome quality assessment (see Methods).
  3. cRefers to the median contig count per dereplicated MAG.
  4. dIncludes the number of samples used for MAG recovery.
  5. eRefers to the number of samples sequenced as part of the study.
  6. fSequencing yield statistics were extrapolated from the reported read counts.
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