Extended Data Fig. 5: Extended presentation of RNA-seq data from Fig. 2.
From: Anoxia activates CRISPR–Cas immunity in the mouse intestine
a-b, RNA-sequencing of C. rodentium recovered from the feces of infected, female, C57BL/6 J mice 7 days post inoculation compared to bacteria from oxic culture. 3 animal and 3 oxic samples. False discovery rate, FDR. b, The C. rodentium LEE virulence island was previously demonstrated to be transcribed in mice, but not in LB culture29. Additional data in Supplementary Table 1.
