Extended Data Fig. 7: DNA methylation correlation patterns in gene bodies in the mouse embryo.
From: Scaling and self-similarity in the formation of the embryonic epigenome
(a) Heatmaps showing differences between predicted and observed correlations in DNAme rescaled by the experimental standard error for groups of genes that are differentially up regulated between pairs of embryonic stages, as in Fig. 5d. Significant deviations are marked by black squares (p<0.05, two-sided ttest) and significant deviations preceding changes in gene expression are marked by red squares. The same heatmaps are shown for (b) gene bodies of pluripotency genes, and (c) gene bodies of the top and bottom 2000 expressed genes excluding pluripotency genes.
