Extended Data Fig. 8: The effects of eIF5B mutations on the kinetics of 60S joining and the transition to elongation. | Nature

Extended Data Fig. 8: The effects of eIF5B mutations on the kinetics of 60S joining and the transition to elongation.

From: eIF5B gates the transition from translation initiation to elongation

Extended Data Fig. 8

a, b, The cumulative probability distributions of the dwell times for 60S joining (a) and the transition to elongation (b) from experiments performed with unlabelled wild-type eIF5B (n = 164), the eIF5B(T439A) mutant (n = 131) or the eIF5B(H505Y) mutant (n = 119) and the model mRNA at 20 °C in the presence of 3 mM Mg2+ and 1 mM GTP. c, The estimated average fast and slow phase rates (kfast and kslow) and amplitudes (Afast and Aslow) of 60S joining (from a) and Δt values (from b) with the 95% confidence intervals from fitting the distributions to a double-exponential (wild-type eIF5B and eIF5B(H505Y)) or a single-exponential (eIF5B(T439A)) equation for the 60S joining; or to a single-exponential equation for the transition dwell times. In the case of eIF5B(T439A), out of n = 131 molecules showing 60S joining signal, only n = 17 molecules showed the subsequent signal of aa-tRNA association with the A site. Thus, the eIF5B(T439A) mutant is defective in catalysing subunit joining (consistent with bulk measurement9), and inhibits tRNA association with the A site.

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