Extended Data Fig. 20: Correlation of the number of somatic genomic alterations with RNA alterations.
Scatter plots of log10-transformed frequency of DNA alterations versus log10-transformed frequency of RNA alterations, in which each row is a DNA alteration in the following order: structural variants, copy-number aberrations and non-synonymous variants. Each row is an RNA alteration in the following order: expression outliers, RNA editing, ASE, fusions and splicing. Each point is a sample coloured by histotype, and its position is the log-transformed number of aberrations found in each sample. The Benjamini–Hochberg-adjusted P values are calculated from a likelihood ratio test assuming negative binomial distribution; histotype is used as a confounder.
