Extended Data Fig. 6: SARM1TIR is restricted in the inactive state through interactions with SARM1ARM. | Nature

Extended Data Fig. 6: SARM1TIR is restricted in the inactive state through interactions with SARM1ARM.

From: The NAD+-mediated self-inhibition mechanism of pro-neurodegenerative SARM1

Extended Data Fig. 6

a, Structural comparison of the ARM domains in SARM1, importin-α (PDB code: 1IAL), and β-catenin (PDB code: 2BCT). ARM1-8 of SARM1ARM, ARM3-10 of importin-α, and ARM5-12 of β-catenin are shown. The ARM motifs in the middle adopt the similar conformation and are coloured in grey. However, the conformations of ARM motifs on both ends of SARM1ARM (ARM1, ARM7-8, and the last helix of ARM6; coloured in green) are different from those of the corresponding ARM motifs in importin-α (ARM3, ARM9-10, and the last helix of ARM8; coloured in yellow) or β-catenin (ARM5, ARM11-12, and the last helix of ARM10; coloured in pink). The last helix of ARM6 in SARM1ARM and its corresponding helices in importin-α and β-catenin are marked out with dashed circles. Their orientations are indicated with arrows. b, Detailed interactions between the two neighbouring SARM1ARM (green box), and between SARM1ARM and the two closely packed SARM1SAM (pink boxes). c, Cryo-EM densities (black mesh) of the BB-loop in the NAD+-bound SARM1(E642A) structure. Atomic models of αA and BB-loop are coloured in wheat and red, respectively. Relevant residues are shown with side chains. d, Cryo-EM densities of the BB-loop in SARM1 (blue mesh) and NAD+-bound SARM1 (green mesh) structures. The atomic model of the BB-loop in NAD+-bound SARM1(E642A) structure is shown as a reference. The contour levels of the maps in c and d are 6.0. e, The inactive conformation of SARM1TIR is designated by its interactions with the two adjacent SARM1ARM. f, The αA helix and BB-loop of different TIR domains are prone to mediate protein–protein interactions. The RRS1/RPS4 heterodimer (PDB code: 4C6T) is formed through interactions between their αA helices (in wheat), and the TLR10 homodimer (PDB code: 2J67) is assembled via the BB-loop interaction (in red). Two subunits are coloured in cyan and green, respectively.

Back to article page