Extended Data Fig. 3: Confirmation of the MSSDR translocation in the marmoset Y chromosome.
From: Evolutionary and biomedical insights from a marmoset diploid genome assembly
a, Marmoset Y-chromosome-specific BAC reads were obtained from the NCBI trace archive and constructed into a pseudo-Y chromosome according to their position from a previous study20. The linear alignment between mCalJac1’s Y chromosome and marmoset bacterial artificial chromosome mapped to the Y chromosome confirms the MSSDR translocation. The MSSDR translocation on the Y chromosome is highlighted in yellow and the two regions that span the break points and its flanking 50 kb are highlighted in dashed boxes. b, The region spanning ASMTLY and P2RY8Y is supported by PacBio reads and 10X linked-reads (only a proportion of them were shown). In the 10X linked-reads panel, each rectangle represents a read and each line represents a 10X DNA molecule. A total of 81 10X linked-read DNA molecules support the linkage of ASMTLY and P2RY8Y. c, The region spanning CD99Y and DDX3Y is supported by PacBio reads and 10X linked-reads (only a proportion of them shown). A total of 110 10X linked-read DNA molecules support the linkage of CD99Y and DDX3Y.
