Extended Data Fig. 7: Maximum Likelihood tree to confirm the topological placement of GB-CC064 and TNP-418.

286 genomes (Supplementary Table 6) were used, including the two new chimpanzee strains (in bold red), 500 bootstrap replicates (value in black with the Tamura Nei model and in blue for the general time model) and M. lepromatosis as outgroup. Sites with missing data were partially deleted (80% genome coverage cutoff). a, Maximum Likelihood tree of the branch 2F. b, Maximum Likelihood tree of the branch 4.