Fig. 4: Deconvolution recovers a fine-grained estimate of virus population dynamics.
From: Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission
a,b, Prevalence of SARS-CoV-2 variants in UCSD clinical surveillance (a) and variant prevalence in all clinical samples collected in San Diego County (b). c,d, Variant prevalence in wastewater at UCSD (c) and the greater San Diego County (d). Further analysis of Point Loma wastewater samples is shown in Extended Data Fig. 5. All curves show the rolling average, with a window of ±10 days. ‘Other’ contains all lineages not designated as VOCs. The bottom panels show the number of sequenced samples per day.
