Extended Data Fig. 4: Further analysis of spatial-ATAC-RNA-seq for P22 mouse brain. | Nature

Extended Data Fig. 4: Further analysis of spatial-ATAC-RNA-seq for P22 mouse brain.

From: Spatial epigenome–transcriptome co-profiling of mammalian tissues

Extended Data Fig. 4: Further analysis of spatial-ATAC-RNA-seq for P22 mouse brain.The alternative text for this image may have been generated using AI.

a, Spatial mapping of gene activity scores and gene expression for selected marker genes in spatial-ATAC-RNA-seq. b, Genome track visualization of marker genes with peak-to-gene links for distal regulatory elements and peak co-accessibility. c, Spatial mapping of cell types identified by label transfer from scATAC-seq30 to ATAC data. IT: intratelencephalic. PT: pyramidal tract. NP: near-projecting. CT: corticothalamic. L: layer. d, Spatial mapping of cell types identified by label transfer from scRNA-seq32 to RNA data.

Back to article page