Extended Data Fig. 5: Allele-specific ribosome occupancy and RNA expression.
From: Single-cell quantification of ribosome occupancy in early mouse development
a, Reads from RNA-seq experiments that overlap strain-specific SNPs were used to determine the percentage of reads that match the maternal (green) and paternal (red) allele. A small percentage of reads differed from either allele and are labeled as “other” (dark blue). b, Ribosome footprints from Ribo-ITP experiments were used as in panel a. c, The percentage of RNA sequencing reads that originate from the paternal allele was visualized for genes with at least 10 allele-specific reads at each stage. d, The percentage of ribosome footprints that were assigned to the paternal allele was plotted for the set of genes in panel c.
